RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 MYLIPQ8WY64 445 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 RHOVQ96L33 236 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SPATA33Q96N06 139 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 C1QTNF2Q9BXJ5 285 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 RERGLQ9H628 205 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CXorf36Q9H7Y0 433 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SIRT7Q9NRC8 400 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ARL15Q9NXU5 204 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 LHX6Q9UPM6 363 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 OR10H1Q9Y4A9 318 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 COL4A5P29400 1685 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 A0A1B0GVC2 190 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 DAPL1A0PJW8 107 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 A6NIN4 97 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 A6NLC8 198 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 GMFGO60234 142 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 PAPLNO95428 1278 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 NSA2O95478 260 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 HMGA1P17096 107 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 FGF7P21781 194 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CDK2P24941 298 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 GPR15P49685 360 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 PRKXP51817 358 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CASP6P55212 293 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 TBX4P57082 545 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CYCSP99999 105 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 RPE65Q16518 533 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 PRSS53Q2L4Q9 553 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 AWAT1Q58HT5 328 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ZNF311Q5JNZ3 666 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 LCTLQ6UWM7 567 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 TPGS1Q6ZTW0 290 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 NXPE1Q8N323 547 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 TRAM1L1Q8N609 369 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SUN3Q8TAQ9 357 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SNX33Q8WV41 574 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ASB17Q8WXJ9 295 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 GHSRQ92847 366 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 MUCL1Q96DR8 90 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ORAI3Q9BRQ5 295 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 NRSN2Q9GZP1 204 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 LRFN1Q9P244 771 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 P2RX2Q9UBL9 471 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CACNG4Q9UBN1 327 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 AKT3Q9Y243 479 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 NUP214P35658 2090 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 COL4A3Q01955 1670 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 TRBV5-5A0A0J9YX44 114 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 MBLAC1A4D2B0 266 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CEACAM18A8MTB9 384 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 PIN1P1O15428 100 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 F12P00748 615 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 NDUFV2P19404 249 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SRMP19623 302 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 RGRP47804 291 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SLC11A2P49281 568 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 OR2B8PP59922 312 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ACTBP60709 375 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 STXBP1P61764 594 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SKP1P63208 163 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ACTG1P63261 375 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SKP2Q13309 424 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 OR8G1Q15617 311 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 RBM45Q8IUH3 476 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 DND1Q8IYX4 353 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 BBS1Q8NFJ9 593 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 CLP1Q92989 425 aaKnown RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 WFDC6Q9BQY6 131 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 C16orf70Q9BSU1 422 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 KCNK12Q9HB15 430 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ZDHHC3Q9NYG2 299 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 COMMD9Q9P000 198 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 TAAR2Q9P1P5 351 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 PRODH2Q9UF12 536 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 ZNF223Q9UK11 482 aaPredicted RBP4.39□□□□□ -1.71
PRKD3-210ENST00000494667 FBXO7Q9Y3I1 522 aa4.39□□□□□ -1.71
PRKD3-210ENST00000494667 SMIM35A0A1B0GVV1 85 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 A0A1W2PPH5 198 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 LNP1A1A4G5 178 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 PRAMEF27A3QJZ7 478 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 OR2AT4A6NND4 320 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 HSPB2A8KAH6 182 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 C9J4A7 227 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 SOCS6O14544 535 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 EIF1AYO14602 144 aaKnown RBP4.38□□□□□ -1.71
PRKD3-210ENST00000494667 DDNO94850 711 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-210ENST00000494667 SLCO2B1O94956 709 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 OR5AC1P0C628 307 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 ACVRL1P37023 503 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 EIF1AXP47813 144 aaKnown RBP4.38□□□□□ -1.71
PRKD3-210ENST00000494667 ST3GAL3Q11203 375 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 GAMTQ14353 236 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 ELAVL1Q15717 326 aaKnown RBP4.38□□□□□ -1.71
PRKD3-210ENST00000494667 HSPB2Q16082 182 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 NDUFAF6Q330K2 333 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 ZNF684Q5T5D7 378 aa4.38□□□□□ -1.71
PRKD3-210ENST00000494667 SP5Q6BEB4 398 aaPredicted RBP4.38□□□□□ -1.71
PRKD3-210ENST00000494667 ARL9Q6T311 187 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms