RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 COPS3Q9UNS2 423 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 RABL2BQ9UNT1 228 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 NEU3Q9UQ49 428 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 V9GY05 133 aa3.06□□□□□ -1.92
SMC4-224ENST00000494612 ANKRD26Q9UPS8 1709 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 KIF24Q5T7B8 1368 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 NSG1A0A0A6YYJ2 146 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 HELTA6NFD8 242 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 TRIM64CA6NLI5 447 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 IDSB3KWA1 339 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 UGT1A9O60656 530 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 SNAPINO95295 136 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 OXSR1O95747 527 aaPredicted RBP3.05□□□□□ -1.92
SMC4-224ENST00000494612 P04436 131 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 COX7A1P24310 79 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 CXCR2P25025 360 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 PTGDSP41222 190 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 KLK7P49862 253 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 IL24Q13007 206 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 CHIT1Q13231 466 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 ARFRP1Q13795 201 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 MAJINQ3KP22 176 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 OR2G6Q5TZ20 316 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 C1orf146Q5VVC0 180 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 OTPQ5XKR4 325 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 SLC26A11Q86WA9 606 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 MFSD9Q8NBP5 474 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 STEAP2Q8NFT2 490 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 OR5D13Q8NGL4 314 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 FANK1Q8TC84 345 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 SETD7Q8WTS6 366 aaKnown RBP3.05□□□□□ -1.92
SMC4-224ENST00000494612 HTR3CQ8WXA8 447 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 EFHD2Q96C19 240 aaPredicted RBP3.05□□□□□ -1.92
SMC4-224ENST00000494612 RPRD1AQ96P16 312 aaPredicted RBP3.05□□□□□ -1.92
SMC4-224ENST00000494612 PSKH2Q96QS6 385 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 CRACR2AQ9BSW2 395 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 TMEM43Q9BTV4 400 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 CAPS2Q9BXY5 557 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 ACTR6Q9GZN1 396 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 FOLH1BQ9HBA9 442 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 SMOXQ9NWM0 555 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 DCDC2Q9UHG0 476 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 SLCO1B1Q9Y6L6 691 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 FER1L6Q2WGJ9 1857 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 NRXN2Q9P2S2 1712 aa3.05□□□□□ -1.92
SMC4-224ENST00000494612 CARMIL3Q8ND23 1372 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 TCRBV9S1A1TA0A576 114 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 RIPK2O43353 540 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 MED7O43513 233 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 ZNF780AO75290 641 aaPredicted RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 SPAG6O75602 509 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 KLF8O95600 359 aaPredicted RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 ZNF853P0CG23 659 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 NPR2P20594 1047 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 COX5AP20674 150 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 CALCRP30988 508 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 MAGEA8P43361 318 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 ATP1B3P54709 279 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 PSG7Q13046 419 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 GPM6BQ13491 265 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 VGLL4Q14135 290 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 NSDHLQ15738 373 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 DPYSL2Q16555 572 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 EXOC3L2Q2M3D2 409 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 LRRC23Q53EV4 343 aaPredicted RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 EOGTQ5NDL2 527 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 SAMD4BQ5PRF9 694 aaKnown RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 OR52E8Q6IFG1 317 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 ZNF530Q6P9A1 599 aaPredicted RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 HSDL2Q6YN16 418 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 Q6ZN92 141 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 PGAP1Q75T13 922 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 ECHDC2Q86YB7 292 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 C6orf223Q8N319 242 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 Q8N7P7 452 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 SCFD1Q8WVM8 642 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 RDH5Q92781 318 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 N4BP2L2Q92802 583 aaPredicted RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 PAGE5Q96GU1 130 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 TCEANC2Q96MN5 208 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 CLCC1Q96S66 551 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 CCT7Q99832 543 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 MRPL45Q9BRJ2 306 aaKnown RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 REEP4Q9H6H4 257 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 SUDS3Q9H7L9 328 aaPredicted RBP3.04□□□□□ -1.92
SMC4-224ENST00000494612 ZDHHC11Q9H8X9 412 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 SH2D2AQ9NP31 389 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 NUDT15Q9NV35 164 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 ADAM22Q9P0K1 906 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 RPS6KB2Q9UBS0 482 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 SEC14L3Q9UDX4 400 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 TJP1Q07157 1748 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 LTBP1Q14766 1721 aa3.04□□□□□ -1.92
SMC4-224ENST00000494612 ANKRD31Q8N7Z5 1873 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 TONSLQ96HA7 1378 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 ADAMTSL1Q8N6G6 1762 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 TRAV26-1A0A087WT03 109 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 A0A0G2JLM5 398 aa3.03□□□□□ -1.92
SMC4-224ENST00000494612 IQANK1A0A1B0GTG1 560 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms