RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 OR5J2Q8NH18 312 aa29■■■□□ 2.23
CBX4-203ENST00000494546 TXNDC15Q96J42 360 aa29■■■□□ 2.23
CBX4-203ENST00000494546 MPP4Q96JB8 637 aa29■■■□□ 2.23
CBX4-203ENST00000494546 NELFAQ9H3P2 528 aa29■■■□□ 2.23
CBX4-203ENST00000494546 CRLF2Q9HC73 371 aa29■■■□□ 2.23
CBX4-203ENST00000494546 C11orf98E9PRG8 122 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 CCDC22O60826 627 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 SHOX2O60902 331 aaPredicted RBP28.99■■■□□ 2.23
CBX4-203ENST00000494546 ADORA3P0DMS8 318 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 ZNF74Q16587 644 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 DEF8Q6ZN54 512 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 MAGEE2Q8TD90 523 aaPredicted RBP28.99■■■□□ 2.23
CBX4-203ENST00000494546 ZNF837Q96EG3 531 aaPredicted RBP28.99■■■□□ 2.23
CBX4-203ENST00000494546 GRIP2Q9C0E4 1043 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 MOKQ9UQ07 419 aa28.99■■■□□ 2.23
CBX4-203ENST00000494546 ARPC4-TTLL3A0A0A6YYG9 625 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 SLC35F4A4IF30 521 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 ATP6V1G2-DDX39BF2Z307 99 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 OR6A2O95222 327 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 COX4I1P13073 169 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 PHYHD1Q5SRE7 291 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 PXKQ7Z7A4 578 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 MICU2Q8IYU8 434 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 MUC15Q8N387 334 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 SLC38A2Q96QD8 506 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 NANSQ9NR45 359 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 CBLN4Q9NTU7 201 aa28.98■■■□□ 2.23
CBX4-203ENST00000494546 SETD2Q9BYW2 2564 aaPredicted RBP28.98■■■□□ 2.23
CBX4-203ENST00000494546 IGHV1-18A0A0C4DH31 117 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 ZNF726A6NNF4 738 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 NDUFS7O75251 213 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 OR1E2P47887 323 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 TAS2R41P59536 307 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 CLEC12BQ2HXU8 276 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 CYBRD1Q53TN4 286 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 C20orf196Q8IYI0 205 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 PRSS27Q9BQR3 290 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 SLC19A3Q9BZV2 496 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 CMTM6Q9NX76 183 aa28.97■■■□□ 2.23
CBX4-203ENST00000494546 GDF2Q9UK05 429 aaPredicted RBP28.97■■■□□ 2.23
CBX4-203ENST00000494546 ELOVL7A1L3X0 281 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 SEC14L2O76054 403 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 IGHV4-39P01824 125 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 KDELR2P33947 212 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 CAMK2DQ13557 499 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 ZNF544Q6NX49 715 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 NHLRC1Q6VVB1 395 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 ARPINQ7Z6K5 226 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 TPD52L3Q96J77 140 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 HS6ST2Q96MM7 605 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 KCNS3Q9BQ31 491 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 ZNF426Q9BUY5 554 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 CACNG6Q9BXT2 260 aa28.96■■■□□ 2.23
CBX4-203ENST00000494546 FAM171A2A8MVW0 826 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 UMPSP11172 480 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 HOXB1P14653 301 aaPredicted RBP28.95■■■□□ 2.22
CBX4-203ENST00000494546 PAX7P23759 505 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 ETFDHQ16134 617 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 SPATA21Q7Z572 469 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 WDFY1Q8IWB7 410 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 LRRC17Q8N6Y2 441 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 OR6N1Q8NGY5 312 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 ELAC2Q9BQ52 826 aaKnown RBP28.95■■■□□ 2.22
CBX4-203ENST00000494546 B3GAT2Q9NPZ5 323 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 GMPR2Q9P2T1 348 aaKnown RBP28.95■■■□□ 2.22
CBX4-203ENST00000494546 AP3M1Q9Y2T2 418 aa28.95■■■□□ 2.22
CBX4-203ENST00000494546 HIST1H2ABP04908 130 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 IFNGR1P15260 489 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 ACVR1BP36896 505 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 TNK1Q13470 666 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 C11orf71Q6IPW1 123 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 HIST3H2AQ7L7L0 130 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 SLC15A3Q8IY34 581 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 HIST1H2ACQ93077 130 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 LRR1Q96L50 414 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 RIMS3Q9UJD0 308 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 ZNF229Q9UJW7 825 aa28.94■■■□□ 2.22
CBX4-203ENST00000494546 ZNF99A8MXY4 864 aaPredicted RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 RNF13O43567 381 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 OR5F1O95221 314 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 LY6G6DO95868 133 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 SEC24CP53992 1094 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 BIDP55957 195 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 PIN1Q13526 163 aaPredicted RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 TREML1Q86YW5 311 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 NKAIN4Q8IVV8 208 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 ADAD1Q96M93 576 aaKnown RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 POLR2J2Q9GZM3 115 aaKnown RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 FAM107BQ9H098 131 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 POLR2J3Q9H1A7 115 aaKnown RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 MEPEQ9NQ76 525 aaPredicted RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 TAS2R5Q9NYW4 299 aa28.93■■■□□ 2.22
CBX4-203ENST00000494546 CRNNQ9UBG3 495 aaPredicted RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 HEATR1Q9H583 2144 aaKnown RBP28.93■■■□□ 2.22
CBX4-203ENST00000494546 CRYAAP02489 173 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 HEXAP06865 529 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 CAPZA2P47755 286 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 LIPEQ05469 1076 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 SLC35D2Q76EJ3 337 aa28.92■■■□□ 2.22
CBX4-203ENST00000494546 TMEM255BQ8WV15 326 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 494.3 ms