RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SSTR2P30874 369 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 DNAJA1P31689 397 aaKnown RBP11.93□□□□□ -0.5
COL1A1-208ENST00000494334 CCDC121Q6ZUS5 278 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 SLC35D2Q76EJ3 337 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 ADGRG5Q8IZF4 528 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 CDK20Q8IZL9 346 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 TMEM123Q8N131 208 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 OR4K5Q8NGD3 323 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 MOSPD2Q8NHP6 518 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 CANT1Q8WVQ1 401 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 ZC3HAV1LQ96H79 300 aaKnown RBP11.93□□□□□ -0.5
COL1A1-208ENST00000494334 OR2M2Q96R28 347 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 LINC00470Q9BZP3 86 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 MMADHCQ9H3L0 296 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-208ENST00000494334 TAS2R16Q9NYV7 291 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 HIF3AQ9Y2N7 669 aa11.93□□□□□ -0.5
COL1A1-208ENST00000494334 TRAV27A0A087WT01 109 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 A6NNC1 897 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 ZNF726A6NNF4 738 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 EBAG9O00559 213 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 CDC42EP2O14613 210 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 AKAP8O43823 692 aaKnown RBP11.92□□□□□ -0.5
COL1A1-208ENST00000494334 RAD51DO75771 328 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 KRT33AO76009 404 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 F13BP05160 661 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 RAP2AP10114 183 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 SAGP10523 405 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-208ENST00000494334 MPGP29372 298 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 GPR4P46093 362 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 OMPP47874 163 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 LIMS1P48059 325 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 SLC9A3P48764 834 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 HMGA2P52926 109 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 BIDP55957 195 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 RPS4XP62701 263 aaKnown RBP11.92□□□□□ -0.5
COL1A1-208ENST00000494334 FHL1Q13642 323 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 C9orf135Q5VTT2 229 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 CARD17Q5XLA6 110 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 ASRGL1Q7L266 308 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 LINGO2Q7L985 606 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 OR51A7Q8NH64 312 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
COL1A1-208ENST00000494334 LRR1Q96L50 414 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 MUS81Q96NY9 551 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 ALKBH3Q96Q83 286 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-208ENST00000494334 ALPK1Q96QP1 1244 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 TNFRSF13CQ96RJ3 184 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 CHID1Q9BWS9 393 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 MCCC2Q9HCC0 563 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 INIPQ9NRY2 104 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 ZNF226Q9NYT6 803 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 AURKCQ9UQB9 309 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 TMEM5Q9Y2B1 443 aa11.92□□□□□ -0.5
COL1A1-208ENST00000494334 TCRBV3S1A0A5B6 114 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 DHRS12A0PJE2 317 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 CIB4A0PJX0 185 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ZNF587BE7ETH6 402 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 CLOCKO15516 846 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 CTAG2O75638 210 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 KRT36O76013 467 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 BCL10O95999 233 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 CRYGSP22914 178 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 CAMK2DQ13557 499 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 MELKQ14680 651 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 TAB1Q15750 504 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 GABRA6Q16445 453 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ANKDD1AQ495B1 522 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ALG10Q5BKT4 473 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 PHYHD1Q5SRE7 291 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ABHD12BQ7Z5M8 362 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ZER1Q7Z7L7 766 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 OAFQ86UD1 273 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 C20orf196Q8IYI0 205 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 LRRC75AQ8NAA5 344 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 OR6X1Q8NH79 312 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 HSD17B8Q92506 261 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ADAD1Q96M93 576 aaKnown RBP11.91□□□□□ -0.5
COL1A1-208ENST00000494334 GPA33Q99795 319 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
COL1A1-208ENST00000494334 RASSF1Q9NS23 344 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.91□□□□□ -0.5
COL1A1-208ENST00000494334 TMCC3Q9ULS5 477 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 LYVE1Q9Y5Y7 322 aa11.91□□□□□ -0.5
COL1A1-208ENST00000494334 A0A1W2PRG6 482 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 OR5H1A6NKK0 313 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 DEFB108AA8MXU0 73 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 RPL36A-HNRNPH2H7BZ11 118 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 M0R3G1 203 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 TNFRSF11BO00300 401 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 SIAH2O43255 324 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 KLF4O43474 513 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 OR10H3O60404 316 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 PTP4A3O75365 173 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 ERFP50548 548 aa11.9□□□□□ -0.5
COL1A1-208ENST00000494334 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms