RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 LIN52Q52LA3 116 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 SHEQ5VZ18 495 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 ZNF836Q6ZNA1 936 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 ZNF704Q6ZNC4 412 aaPredicted RBP7.12□□□□□ -1.27
RIF1-211ENST00000494333 BHLHA15Q7RTS1 189 aaPredicted RBP7.12□□□□□ -1.27
RIF1-211ENST00000494333 FUNDC1Q8IVP5 155 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 ZNF440Q8IYI8 595 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 LRRC75A-AS1Q8N1F1 130 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 UBE2J2Q8N2K1 259 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 CLIP4Q8N3C7 705 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 PIGXQ8TBF5 258 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 MAL2Q969L2 176 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 DDIT4LQ96D03 193 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 TMEM19Q96HH6 336 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 DCLRE1CQ96SD1 692 aaKnown RBP7.12□□□□□ -1.27
RIF1-211ENST00000494333 PAIP1Q9H074 479 aaKnown RBP7.12□□□□□ -1.27
RIF1-211ENST00000494333 THUMPD1Q9NXG2 353 aaKnown RBP7.12□□□□□ -1.27
RIF1-211ENST00000494333 EMC3Q9P0I2 261 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 CHST2Q9Y4C5 530 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 HIVEP1P15822 2718 aa7.12□□□□□ -1.27
RIF1-211ENST00000494333 MED13LQ71F56 2210 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 DSPPQ9NZW4 1301 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 IGKV3D-15A0A087WSY6 115 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 CCT8L1PA6NM43 557 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 GPR171O14626 319 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 SLC16A6O15403 523 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 DNPH1O43598 174 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 EIF1BO60739 113 aaKnown RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 PRSS23O95084 383 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 CD1AP06126 327 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 PRG2P13727 222 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 GGT1P19440 569 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 NCF2P19878 526 aaPredicted RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 IGHV1-2P23083 117 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 MRPL19P49406 292 aaKnown RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 BNIP2Q12982 314 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 CEACAM7Q14002 265 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 ZNF311Q5JNZ3 666 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 PAGE3Q5JUK9 113 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 Q5PR19 223 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 NCMAPQ5T1S8 102 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 FBXW9Q5XUX1 488 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 ABLIM2Q6H8Q1 611 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 WBP2NLQ6ICG8 309 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 CADM2Q8N3J6 435 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 ZNF433Q8N7K0 673 aaPredicted RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 ZNF611Q8N823 705 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 AKAP1Q92667 903 aaKnown RBP eCLIP7.11□□□□□ -1.27
RIF1-211ENST00000494333 APH1AQ96BI3 265 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 MUCL1Q96DR8 90 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 SPDL1Q96EA4 605 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 PERPQ96FX8 193 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 C18orf12Q96KH6 178 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 TMEM204Q9BSN7 226 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 NAA11Q9BSU3 229 aaPredicted RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 CCDC28BQ9BUN5 200 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 POTEKPQ9BYX7 375 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 RAD21L1Q9H4I0 556 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 ARMC7Q9H6L4 198 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 ESRP2Q9H6T0 727 aaKnown RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 CACYBPQ9HB71 228 aaKnown RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 INTS9Q9NV88 658 aaKnown RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 ZNF443Q9Y2A4 671 aaPredicted RBP7.11□□□□□ -1.27
RIF1-211ENST00000494333 IFT52Q9Y366 437 aa7.11□□□□□ -1.27
RIF1-211ENST00000494333 A0A096LPI6 279 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 CIB4A0PJX0 185 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 DPRXA6NFQ7 191 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 HMGB1P1B2RPK0 211 aaPredicted RBP7.1□□□□□ -1.27
RIF1-211ENST00000494333 C5orf58C9J3I9 102 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 NR5A2O00482 541 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 HS3ST1O14792 307 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 RAD51DO75771 328 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 AKR7A3O95154 331 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 PGM3O95394 542 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 GPIP06744 558 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 FOXG1P55316 489 aaPredicted RBP7.1□□□□□ -1.27
RIF1-211ENST00000494333 BSPH1Q075Z2 132 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 FADDQ13158 208 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 PPA1Q15181 289 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 OR7A5Q15622 319 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 ZSWIM7Q19AV6 140 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 AGKQ53H12 422 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 TIMM23BQ5SRD1 257 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 LRIF1Q5T3J3 769 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 RNF220Q5VTB9 566 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 TMEM225Q6GV28 225 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 PAQR6Q6TCH4 344 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 YTHDF3Q7Z739 585 aaKnown RBP7.1□□□□□ -1.27
RIF1-211ENST00000494333 SERPINA11Q86U17 422 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 P2RY8Q86VZ1 359 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 TMEM99Q8N816 258 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 IL17RDQ8NFM7 739 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 LILRB1Q8NHL6 650 aaPredicted RBP7.1□□□□□ -1.27
RIF1-211ENST00000494333 TMEM171Q8WVE6 324 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 CKAP2Q8WWK9 683 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 THOC1Q96FV9 657 aaKnown RBP7.1□□□□□ -1.27
RIF1-211ENST00000494333 Q96MF0 132 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 SMR3AQ99954 134 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
RIF1-211ENST00000494333 BCL2L10Q9HD36 194 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms