RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SONP18583 2426 aaKnown RBP7.97□□□□□ -1.13
HDAC3-212ENST00000492407 ABCA1O95477 2261 aa7.96□□□□□ -1.13
HDAC3-212ENST00000492407 FREM1Q5H8C1 2179 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 PRR14LQ5THK1 2151 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 A0A1W2PR80 420 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF587BE7ETH6 402 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 ATP6V1G2-DDX39BF2Z307 99 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 RPL36A-HNRNPH2H7BZ11 118 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 FZD7O75084 574 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 KRT33AO76009 404 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 OPN1MWP04001 364 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 OPN1MW2P0DN77 364 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 OPN1MW3P0DN78 364 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 HNF1AP20823 631 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 ACAA2P42765 397 aaKnown RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 NR4A2P43354 598 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 PPOXP50336 477 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 P2RY4P51582 365 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CRISP3P54108 245 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 UBE2NP61088 152 aaKnown RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 UFM1P61960 85 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 SLC25A3Q00325 362 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 POU3F1Q03052 451 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CEACAM7Q14002 265 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 LARS2Q15031 903 aaKnown RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 TBRG1Q3YBR2 411 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 TNFAIP8L3Q5GJ75 292 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 C1orf140Q5VVS0 124 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 PRAMEF8Q5VWM4 474 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 PRAMEF7Q5VXH5 474 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 FAM166AQ6J272 317 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 ANKRD16Q6P6B7 361 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 C5orf46Q6UWT4 87 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CREB3L2Q70SY1 520 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 TMEM99Q8N816 258 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 NUP37Q8NFH4 326 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 OR1K1Q8NGR3 316 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 OR52P1PQ8NH57 321 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 MFSD8Q8NHS3 518 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 NANOS1Q8WY41 292 aaKnown RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 BCL2L2Q92843 193 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 HPS1Q92902 700 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 AURKBQ96GD4 344 aaPredicted RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CDRT15Q96T59 188 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 KCNS3Q9BQ31 491 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CCDC28BQ9BUN5 200 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 C1QTNF6Q9BXI9 259 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 C20orf27Q9GZN8 174 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 FAM192AQ9GZU8 254 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 PLK3Q9H4B4 646 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 RAD21L1Q9H4I0 556 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 IFT22Q9H7X7 185 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 MANSC1Q9H8J5 431 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CACYBPQ9HB71 228 aaKnown RBP7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CRLF2Q9HC73 371 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CA10Q9NS85 328 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 SLC7A8Q9UHI5 535 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 KCNS2Q9ULS6 477 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 MOKQ9UQ07 419 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 RCE1Q9Y256 329 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 GPR45Q9Y5Y3 372 aa7.96□□□□□ -1.14
HDAC3-212ENST00000492407 CADP27708 2225 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 IGHV1-18A0A0C4DH31 117 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 LOC100653049A0A140TA62 436 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 LOC102725191A0A1B0GVB3 256 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ZC3H12DA2A288 527 aaKnown RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 RFXANKO14593 260 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 OR2T1O43869 369 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 SLC22A3O75751 556 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 KRT34O76011 436 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 AKR7A3O95154 331 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 IGLV1-44P01699 117 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 HMGN1P05114 100 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ERCC1P07992 297 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ALDOCP09972 364 aaKnown RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 SRD5A1P18405 259 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 GIFP27352 417 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 MVDP53602 400 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 OR7A5Q15622 319 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 MAPK11Q15759 364 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 NET1Q7Z628 596 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF565Q8N9K5 539 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ANGPTL6Q8NI99 470 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 NEU4Q8WWR8 484 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 SLC47A1Q96FL8 570 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 TEX37Q96LM6 180 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 PPP1R36Q96LQ0 422 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF385AQ96PM9 386 aaKnown RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 SPATA9Q9BWV2 254 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 RAB1BQ9H0U4 201 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 DENND2DQ9H6A0 471 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF442Q9H7R0 627 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 RMND5AQ9H871 391 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 BCL2L10Q9HD36 194 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 INIPQ9NRY2 104 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 ARMC1Q9NVT9 282 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 THAP1Q9NVV9 213 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 EXTL2Q9UBQ6 330 aa7.95□□□□□ -1.14
HDAC3-212ENST00000492407 CR1P17927 2039 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms