RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 IL33O95760 270 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 HLA-DQA2P01906 255 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 MAS1P04201 325 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 IGKV3-11P04433 115 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SRMP19623 302 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SLC6A1P30531 599 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 RORAP35398 523 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PSMD4P55036 377 aaKnown RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 LGALS3BPQ08380 585 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 CDK10Q15131 360 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 TCTE1Q5JU00 501 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 FCRLAQ7L513 359 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 LRRC75AQ8NAA5 344 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF527Q8NB42 609 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 DUSP18Q8NEJ0 188 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PHF3Q92576 2039 aaKnown RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 MARVELD1Q9BSK0 173 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 VN1R1Q9GZP7 353 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 UBE2ZQ9H832 354 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ASPMQ8IZT6 3477 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ARPC3O15145 178 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 NDUFB5O43674 189 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 GDF9O60383 454 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 TSC22D2O75157 780 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 OPN1LWP04000 364 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 DCNP07585 359 aaKnown RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 UCHL1P09936 223 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ASAH2BP0C7U1 165 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 FBLP22087 321 aaKnown RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PPICP45877 212 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 NXPH1P58417 271 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 HNRNPKP61978 463 aaKnown RBP eCLIP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SERTAD2Q14140 314 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 GGTLC2Q14390 218 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PLA1AQ53H76 456 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SFRP4Q6FHJ7 346 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 LRRN1Q6UXK5 716 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SIX5Q8N196 739 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SLC25A45Q8N413 288 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 TOMM5Q8N4H5 51 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ZDHHC12Q96GR4 267 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 FAM47E-STBD1D6RA91 191 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ORC5O43913 435 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PRKCAP17252 672 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 GALP22466 123 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 ABCD3P28288 659 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SDHAP31040 664 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 PRPS1P60891 318 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 RRAS2P62070 204 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 RIN1Q13671 783 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 HLA-DQA1Q5Y7H0 255 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SYS1Q8N2H4 156 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 OMA1Q96E52 524 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 UBL7Q96S82 380 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-220ENST00000492280 TBL1XR1Q9BZK7 514 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 FRRS1LQ9P0K9 344 aa11.29□□□□□ -0.6
HMGN1-220ENST00000492280 EML6Q6ZMW3 1958 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 FRYQ5TBA9 3013 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 CPAMD8Q8IZJ3 1885 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 TRAV8-7A0A075B6U6 113 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 IGKV3D-11A0A0A0MRZ8 115 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 TIAF1O95411 115 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 GAAP10253 952 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 HLA-DOBP13765 273 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 ADRA2CP18825 462 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 CXCL3P19876 107 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 CXCR1P25024 350 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 HSD11B2P80365 405 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 BTBD16Q32M84 506 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 TPRA1Q86W33 373 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 WDFY1Q8IWB7 410 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 SLC38A9Q8NBW4 561 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 ZC3HAV1LQ96H79 300 aaKnown RBP11.28□□□□□ -0.6
HMGN1-220ENST00000492280 SNX18Q96RF0 628 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 CDCP1Q9H5V8 836 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 KLK11Q9UBX7 282 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 TEKT2Q9UIF3 430 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 HRH3Q9Y5N1 445 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF879B4DU55 563 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 GMDSO60547 372 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 POU3F3P20264 500 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-220ENST00000492280 UQCRC1P31930 480 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 EXD3Q8N9H8 876 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 SLC46A1Q96NT5 459 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 FGF21Q9NSA1 209 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 LAMP5Q9UJQ1 280 aa11.28□□□□□ -0.6
HMGN1-220ENST00000492280 ZNF222Q9UK12 451 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms