RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 MSANTD1Q6ZTZ1 278 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 EPHX4Q8IUS5 362 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 ANKFN1Q8N957 763 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 ANKK1Q8NFD2 765 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 IL17RDQ8NFM7 739 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 SPDL1Q96EA4 605 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 ITCHQ96J02 903 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 TRNT1Q96Q11 434 aaKnown RBP12.46□□□□□ -0.41
SSR4-212ENST00000491833 RCE1Q9Y256 329 aa12.46□□□□□ -0.41
SSR4-212ENST00000491833 MGAM2Q2M2H8 2515 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 A0A096LPI6 279 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 PRSS51A0A1B0GVH4 220 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 RPL36A-HNRNPH2H7BZ11 118 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 RFXANKO14593 260 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 SLC43A1O75387 559 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 DBIP07108 87 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 DRD4P21917 467 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 GTF2E2P29084 291 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 MRPL19P49406 292 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 EVX1P49640 407 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 ANXA11P50995 505 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 COPZ1P61923 177 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 ARF1P84077 181 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 BNIP2Q12982 314 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 MMEL1Q495T6 779 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 AWAT1Q58HT5 328 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 PRR31Q5SQ13 230 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 GKAP1Q5VSY0 366 aaPredicted RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 C1orf140Q5VVS0 124 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 LRRC74BQ6ZQY2 392 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 MDP1Q86V88 176 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 CADM2Q8N3J6 435 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 RDH5Q92781 318 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 MRPL24Q96A35 216 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 SUCNR1Q9BXA5 334 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 MRPL37Q9BZE1 423 aaKnown RBP12.45□□□□□ -0.42
SSR4-212ENST00000491833 MS4A5Q9H3V2 200 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 REV1Q9UBZ9 1251 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 BTNL2Q9UIR0 455 aa12.45□□□□□ -0.42
SSR4-212ENST00000491833 TRAV20A0A0B4J274 112 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 ZNF503-AS2A6NEH8 195 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 AHSA1O95433 338 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 HPXP02790 462 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 ZNF43P17038 809 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 IL12AP29459 219 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 CLDN17P56750 224 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
SSR4-212ENST00000491833 CEACAM16Q2WEN9 425 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 WBP2NLQ6ICG8 309 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 FAHD2BQ6P2I3 314 aaPredicted RBP12.44□□□□□ -0.42
SSR4-212ENST00000491833 CARM1Q86X55 608 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 RNF130Q86XS8 419 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 CCDC36Q8IYA8 594 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 GPR137CQ8N3F9 429 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 FAHD2AQ96GK7 314 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 TEX37Q96LM6 180 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 CCDC115Q96NT0 180 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 RACGAP1Q9H0H5 632 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 ZNF275Q9NSD4 429 aaPredicted RBP12.44□□□□□ -0.42
SSR4-212ENST00000491833 FAM53CQ9NYF3 392 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 TREM2Q9NZC2 230 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
SSR4-212ENST00000491833 TMEM229AB2RXF0 380 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 SNX3O60493 162 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 DCTN3O75935 186 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 SEC14L2O76054 403 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 TFPTP0C1Z6 253 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 GKN3PP0CG01 181 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 PNMTP11086 282 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 NR4A1P22736 598 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 RPS23P62266 143 aaKnown RBP12.43□□□□□ -0.42
SSR4-212ENST00000491833 LIN52Q52LA3 116 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 ZNF311Q5JNZ3 666 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 ZNF621Q6ZSS3 439 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 PEX5LQ8IYB4 626 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 VPS33AQ96AX1 596 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 ZNF416Q9BWM5 594 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 RAD21L1Q9H4I0 556 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 MTHFD2LQ9H903 347 aaPredicted RBP12.43□□□□□ -0.42
SSR4-212ENST00000491833 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.43□□□□□ -0.42
SSR4-212ENST00000491833 LEF1Q9UJU2 399 aaPredicted RBP12.43□□□□□ -0.42
SSR4-212ENST00000491833 ARL2BPQ9Y2Y0 163 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 NOX1Q9Y5S8 564 aa12.43□□□□□ -0.42
SSR4-212ENST00000491833 LOC105371242A0A075B767 164 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 CDHR4A6H8M9 788 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 ZNF99A8MXY4 864 aaPredicted RBP12.42□□□□□ -0.42
SSR4-212ENST00000491833 NDUFAB1O14561 156 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 SLC22A2O15244 555 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 PPIHO43447 177 aaKnown RBP12.42□□□□□ -0.42
SSR4-212ENST00000491833 AKAP8O43823 692 aaKnown RBP12.42□□□□□ -0.42
SSR4-212ENST00000491833 NPIPB7O75200 414 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 ZNF432O94892 652 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 KRT75O95678 551 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 GSNP06396 782 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 NR2F1P10589 423 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 TCN1P20061 433 aaPredicted RBP12.42□□□□□ -0.42
SSR4-212ENST00000491833 COL8A2P25067 703 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 ALDH3B1P43353 468 aa12.42□□□□□ -0.42
SSR4-212ENST00000491833 TMEM33P57088 247 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms