RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 GATSQ8NAP1 163 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 IL17RDQ8NFM7 739 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 OR5J2Q8NH18 312 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ZNF563Q8TA94 476 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ZNRF4Q8WWF5 429 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 HIST1H2ACQ93077 130 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 NTNG2Q96CW9 530 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 CLIP3Q96DZ5 547 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ZMYND19Q96E35 227 aaPredicted RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 Q96M85 177 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 OR6C1Q96RD1 312 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 SPSB2Q99619 263 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 CTRCQ99895 268 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 CYSLTR2Q9NS75 346 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 MRPL39Q9NYK5 338 aaKnown RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 TAS2R5Q9NYW4 299 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 C19orf25Q9UFG5 118 aaPredicted RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 TMED7Q9Y3B3 224 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ANKRD11Q6UB99 2663 aaPredicted RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 TEX13CA0A0J9YWL9 993 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 SPAARA0A1B0GVQ0 90 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 CD8B2A6NJW9 211 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 BLOC1S5-TXNDC5H3BN57 136 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 GNB5O14775 395 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 PHYHO14832 338 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 ZNF208O43345 1280 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 PRKNO60260 465 aaPredicted RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 TRIM3O75382 744 aaPredicted RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 GYPBP06028 91 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 HEXBP07686 556 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 MRPL3P09001 348 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 TACSTD2P09758 323 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 CD8BP10966 210 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 NPR2P20594 1047 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 PYCR1P32322 319 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 APOBEC1P41238 236 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 RPS5P46782 204 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 SLC16A1P53985 500 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 EMP2P54851 167 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 EGR3Q06889 387 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 ZFP36L1Q07352 338 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 QPRTQ15274 297 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 YIF1BQ5BJH7 314 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 MESTQ5EB52 335 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 ZMAT1Q5H9K5 638 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 HACD4Q5VWC8 232 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 FDX2Q6P4F2 183 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 LEG1Q6P5S2 330 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 ARL9Q6T311 187 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 LYPD8Q6UX82 237 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 FAM131AQ6UXB0 335 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 NANOGNBQ7Z5D8 188 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 CPEB2Q7Z5Q1 589 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 CEACAM19Q7Z692 300 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 JAZF1Q86VZ6 243 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 NR2C2APQ86WQ0 139 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 LRRC28Q86X40 367 aaPredicted RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 PRR22Q8IZ63 422 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 BMPERQ8N8U9 685 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 ZNF519Q8TB69 540 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 SNRNP27Q8WVK2 155 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 METTL21AQ8WXB1 218 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 THAP4Q8WY91 577 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 RASD2Q96D21 266 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 CCDC74BQ96LY2 380 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 TSPAN32Q96QS1 320 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 KLHDC3Q9BQ90 382 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 NRSN2Q9GZP1 204 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 PPIL3Q9H2H8 161 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 POLE4Q9NR33 117 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 TAS2R10Q9NYW0 307 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 VSX1Q9NZR4 365 aaPredicted RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 ABRACLQ9P1F3 81 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 GRHPRQ9UBQ7 328 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 NXT1Q9UKK6 140 aaKnown RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 ATXN7L1Q9ULK2 861 aaPredicted RBP9.72□□□□□ -0.85
USP4-214ENST00000491791 FKBP7Q9Y680 259 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 TMEM14AQ9Y6G1 99 aa9.72□□□□□ -0.85
USP4-214ENST00000491791 AKAP13Q12802 2813 aa9.71□□□□□ -0.85
USP4-214ENST00000491791 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 A0A1W2PQ09 198 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 CPED1A4D0V7 1026 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 NOTOA8MTQ0 251 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 CENPBD1B2RD01 187 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 SUSD5O60279 629 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 TPPPO94811 219 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 TIAF1O95411 115 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 CER1O95813 267 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 ABHD16AO95870 558 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 RENP00797 406 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 ZNF883P0CG24 379 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 TRAPPC2P0DI81 140 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 TRAPPC2BP0DI82 140 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 SPNP16150 400 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 MYL9P24844 172 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 SHC1P29353 583 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 RFX2P48378 723 aa9.71□□□□□ -0.86
USP4-214ENST00000491791 GDI2P50395 445 aaKnown RBP9.71□□□□□ -0.86
USP4-214ENST00000491791 CCR4P51679 360 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms