RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 VRK2Q86Y07 508 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 PEX5LQ8IYB4 626 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 TESCQ96BS2 214 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 LRRC58Q96CX6 371 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 C1QTNF5Q9BXJ0 243 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 C7orf69Q9H7B7 122 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF224Q9NZL3 707 aa11.64□□□□□ -0.55
CTDSP1-210ENST00000491064 DSPPQ9NZW4 1301 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 M0R3G1 203 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 TRAF3IP2O43734 574 aaPredicted RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 AKAP8O43823 692 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 NCF2P19878 526 aaPredicted RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 GATA3P23771 443 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 ZFP36P26651 326 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 GTF2E2P29084 291 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 GIPRP48546 466 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 PTDSS1P48651 473 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 CCL8P80075 99 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 TXNL4AP83876 142 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 C1DQ13901 141 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 MAPK11Q15759 364 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 NKPD1Q17RQ9 610 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 MMEL1Q495T6 779 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 LIN52Q52LA3 116 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 SPANXN4Q5MJ08 99 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF813Q6ZN06 617 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF627Q7L945 461 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 MNS1Q8NEH6 495 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 OR52P1PQ8NH57 321 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 EPS8L3Q8TE67 593 aaKnown RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 KTI12Q96EK9 354 aaPredicted RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 APOPT1Q96IL0 206 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 C1orf147Q96MC9 270 aaPredicted RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 CCDC115Q96NT0 180 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 DUX5Q96PT3 197 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 DENND2DQ9H6A0 471 aaPredicted RBP11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 SLC7A8Q9UHI5 535 aa11.63□□□□□ -0.55
CTDSP1-210ENST00000491064 DNAJC9-AS1A6NH13 148 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 M0R082 166 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 RAB36O95755 333 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 CLPTM1O96005 669 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 B4GALT1P15291 398 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 CRYBB2P43320 205 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 ANXA11P50995 505 aaKnown RBP11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 AQP5P55064 265 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 RAB1AP62820 205 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 DPY19L1Q2PZI1 675 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 COX20Q5RI15 118 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 RNF220Q5VTB9 566 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 CARD17Q5XLA6 110 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 RBMS3Q6XE24 437 aaKnown RBP11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 DOK3Q7L591 496 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 C20orf196Q8IYI0 205 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 CLIP4Q8N3C7 705 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF417Q8TAU3 575 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 MGARPQ8TDB4 240 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 PPP1R36Q96LQ0 422 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF587Q96SQ5 575 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 ZMAT3Q9HA38 289 aaKnown RBP11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 PPCSQ9HAB8 311 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 TAAR3PQ9P1P4 343 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 SLC17A7Q9P2U7 560 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 BTNL2Q9UIR0 455 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF443Q9Y2A4 671 aaPredicted RBP11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 WIPI2Q9Y4P8 454 aa11.62□□□□□ -0.55
CTDSP1-210ENST00000491064 IGHV1-69-2A0A0G2JMI3 117 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 LOC102725191A0A1B0GVB3 256 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 CCDC154A6NI56 674 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 POM121CA8CG34 1229 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 AIM2O14862 343 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 NUDT17P0C025 328 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 IL13RA1P78552 427 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 RAB39AQ14964 217 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 MFSD13AQ14CX5 517 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 PCGF3Q3KNV8 242 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 RGS7BPQ6MZT1 257 aaPredicted RBP11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 TMEM154Q6P9G4 183 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 SERPINA11Q86U17 422 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 ZNF584Q8IVC4 421 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 TRIML2Q8N7C3 387 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 PNPT1Q8TCS8 783 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 LRR1Q96L50 414 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 TSPAN32Q96QS1 320 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 RHOXF2Q9BQY4 288 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 SLITRK2Q9H156 845 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 HINT3Q9NQE9 182 aaKnown RBP11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 MED29Q9NX70 200 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 NKIRAS2Q9NYR9 191 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 ARMCX1Q9P291 453 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 POFUT2Q9Y2G5 429 aa11.61□□□□□ -0.55
CTDSP1-210ENST00000491064 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
CTDSP1-210ENST00000491064 CLDN25C9JDP6 229 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms