RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NPAP1Q9NZP6 1156 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 TAGLN3Q9UI15 199 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 B3GALT5Q9Y2C3 310 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 LRCH1Q9Y2L9 728 aa9.09□□□□□ -0.95
TTC28-207ENST00000490475 LIPT2A6NK58 231 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ELOA3DA6NLF2 546 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 A8MV72 311 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 KIAA1324LA8MWY0 1029 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 VSTM5A8MXK1 200 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 M0R1B8 84 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 PDLIM1O00151 329 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 GSTA4O15217 222 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 IGHV3-9P01782 118 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ITGA5P08648 1049 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 TNFRSF1BP20333 461 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 VHLP40337 213 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 CDH12P55289 794 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 SLC25A3Q00325 362 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 EGR4Q05215 589 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 LOXL1Q08397 574 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 OR7A5Q15622 319 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 C3orf36Q3SXR2 165 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ELOA3BQ3SY89 546 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 CHRFAM7AQ494W8 412 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 CYBRD1Q53TN4 286 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 C1orf140Q5VVS0 124 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 C11orf71Q6IPW1 123 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ULK3Q6PHR2 472 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 C5orf46Q6UWT4 87 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ARPINQ7Z6K5 226 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 TSPYL5Q86VY4 417 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 RNF148Q8N7C7 305 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ELOA3Q8NG57 546 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 OR10H5Q8NGA6 315 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 DNAJA4Q8WW22 397 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 PROX1Q92786 737 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 KTI12Q96EK9 354 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 ZNF570Q96NI8 536 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 TNFRSF13CQ96RJ3 184 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 CDRT15Q96T59 188 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 MYOZ1Q9NP98 299 aaPredicted RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 YAE1D1Q9NRH1 226 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 TMEM160Q9NX00 188 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 ADA2Q9NZK5 511 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 STX18Q9P2W9 335 aaKnown RBP9.08□□□□□ -0.96
TTC28-207ENST00000490475 LPAR3Q9UBY5 353 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 AP3M1Q9Y2T2 418 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 SH3GLB1Q9Y371 365 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 FKBP7Q9Y680 259 aa9.08□□□□□ -0.96
TTC28-207ENST00000490475 A0A0B4J2E0 115 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 A0A1B0GX12 115 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 AQP7P3A6NL99 342 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 CPSF4LA6NMK7 179 aaKnown RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 E7EQL1 145 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 ZNF587BE7ETH6 402 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 NDUFS8O00217 210 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 CXCR6O00574 342 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 GYG2O15488 501 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 GSC2O15499 205 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 NPIPB7O75200 414 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 AKR7A3O95154 331 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 IFNA14P01570 189 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 THY1P04216 161 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 RPSAP08865 295 aaKnown RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 NCK1P16333 377 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 PTNP21246 168 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 EDNRAP25101 427 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 GTF2E2P29084 291 aaKnown RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 NTF4P34130 210 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 MSX2P35548 267 aaPredicted RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 RPS5P46782 204 aaKnown RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 OR1E2P47887 323 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 EFNA4P52798 201 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 VLDLRP98155 873 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 KRTAP1-1Q07627 177 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 LRRC23Q53EV4 343 aaPredicted RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 ALG10BQ5I7T1 473 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 ENTPD8Q5MY95 495 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 AAED1Q7RTV5 226 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 RANBP3LQ86VV4 465 aaPredicted RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 CARM1Q86X55 608 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 TMEM99Q8N816 258 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 ANKK1Q8NFD2 765 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 OR9K2Q8NGE7 335 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 STK35Q8TDR2 534 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 RASSF5Q8WWW0 418 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 DNAJC9Q8WXX5 260 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 FAM168AQ92567 244 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 SLC38A4Q969I6 547 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 TAAR8Q969N4 342 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 SLC25A36Q96CQ1 311 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 SLC47A1Q96FL8 570 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 TPD52L3Q96J77 140 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 KCTD14Q9BQ13 255 aaPredicted RBP9.07□□□□□ -0.96
TTC28-207ENST00000490475 EVA1AQ9H8M9 152 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
TTC28-207ENST00000490475 ADPRHL2Q9NX46 363 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms