RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PLPP3O14495 311 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 UMPSP11172 480 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 IFNA8P32881 189 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 CAPZA2P47755 286 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 ARF1P84077 181 aaKnown RBP15.24■□□□□ 0.03
SEC13-218ENST00000490283 LTBQ06643 244 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 MS4A18Q3C1V0 323 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 LRRC23Q53EV4 343 aaPredicted RBP15.24■□□□□ 0.03
SEC13-218ENST00000490283 LINC00114Q6XXX2 140 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 DEF8Q6ZN54 512 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 Q71RC1 249 aaPredicted RBP15.24■□□□□ 0.03
SEC13-218ENST00000490283 CARM1Q86X55 608 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 CCDC36Q8IYA8 594 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 TMEM123Q8N131 208 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 CIARTQ8N365 385 aaPredicted RBP15.24■□□□□ 0.03
SEC13-218ENST00000490283 OR4D11Q8NGI4 311 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 OR6N1Q8NGY5 312 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 C10orf82Q8WW14 230 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 RCN3Q96D15 328 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 LRR1Q96L50 414 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 EMC6Q9BV81 110 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 KATNB1Q9BVA0 655 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 CACNG6Q9BXT2 260 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 POLR2J2Q9GZM3 115 aaKnown RBP15.24■□□□□ 0.03
SEC13-218ENST00000490283 POLR2J3Q9H1A7 115 aaKnown RBP15.24■□□□□ 0.03
SEC13-218ENST00000490283 NANSQ9NR45 359 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 MOKQ9UQ07 419 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 CADP27708 2225 aa15.24■□□□□ 0.03
SEC13-218ENST00000490283 SLC35F4A4IF30 521 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 ZNF99A8MXY4 864 aaPredicted RBP15.23■□□□□ 0.03
SEC13-218ENST00000490283 LRRN3E7EW58 273 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 C11orf98E9PRG8 122 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 ATP6V1G2-DDX39BF2Z307 99 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 CH25HO95992 272 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 HPRP00739 348 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 CD8AP01732 235 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 HLA-DOBP13765 273 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 APOBEC3AP31941 199 aaPredicted RBP15.23■□□□□ 0.03
SEC13-218ENST00000490283 NUDT6P53370 316 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 ZNF74Q16587 644 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 C3orf36Q3SXR2 165 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 B3GLCTQ6Y288 498 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 C20orf196Q8IYI0 205 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 POU5F2Q8N7G0 328 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 LZICQ8WZA0 190 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 ZNF583Q96ND8 569 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 ULBP2Q9BZM5 246 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 MED29Q9NX70 200 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 ZNF229Q9UJW7 825 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 POFUT2Q9Y2G5 429 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 PMF1-BGLAPU3KQ54 211 aa15.23■□□□□ 0.03
SEC13-218ENST00000490283 SETD2Q9BYW2 2564 aaPredicted RBP15.23■□□□□ 0.03
SEC13-218ENST00000490283 IGHV1-18A0A0C4DH31 117 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 ELOVL7A1L3X0 281 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 RNF13O43567 381 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 LY6G6DO95868 133 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 IGHV4-39P01824 125 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 TUBA1BP68363 451 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 TUBA4AP68366 448 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 TNK1Q13470 666 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 RAB35Q15286 201 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 WDR88Q6ZMY6 472 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 TUBA1AQ71U36 451 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 NANOGNBQ7Z5D8 188 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 MICU2Q8IYU8 434 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 FAM169BQ8N8A8 192 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 NANOS1Q8WY41 292 aaKnown RBP15.22■□□□□ 0.03
SEC13-218ENST00000490283 TPD52L3Q96J77 140 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 USP22Q9UPT9 525 aa15.22■□□□□ 0.03
SEC13-218ENST00000490283 ZNF469Q96JG9 3925 aaPredicted RBP15.21■□□□□ 0.03
SEC13-218ENST00000490283 VSTM5A8MXK1 200 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 ENTPD5O75356 428 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 OR5F1O95221 314 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 COX4I1P13073 169 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 CBR1P16152 277 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 KDELR2P33947 212 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 ARR3P36575 388 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 ACVR1BP36896 505 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 RBM34P42696 430 aaKnown RBP15.21■□□□□ 0.03
SEC13-218ENST00000490283 CSNK1A1P48729 337 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 CRYBA2P53672 197 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 BIDP55957 195 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 CAMK2DQ13557 499 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 CYBRD1Q53TN4 286 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 C11orf71Q6IPW1 123 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 TXNDC15Q96J42 360 aa15.21■□□□□ 0.03
SEC13-218ENST00000490283 NSRP1Q9H0G5 558 aaKnown RBP15.21■□□□□ 0.03
SEC13-218ENST00000490283 CRNNQ9UBG3 495 aaPredicted RBP15.21■□□□□ 0.03
SEC13-218ENST00000490283 GDF2Q9UK05 429 aaPredicted RBP15.21■□□□□ 0.03
SEC13-218ENST00000490283 NDUFAB1O14561 156 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 GSTA4O15217 222 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 SSX4O60224 188 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 LYPD3O95274 346 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 THY1P04216 161 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 CECR9P0C854 216 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 THRBP10828 461 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 IFNGR1P15260 489 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 TNFRSF1BP20333 461 aa15.2■□□□□ 0.02
SEC13-218ENST00000490283 NAAAQ02083 359 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms