RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 GATA3P23771 443 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 ALDH3B1P43353 468 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 SEC24CP53992 1094 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 CLNS1AP54105 237 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 COPZ1P61923 177 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 DEFA6Q01524 100 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 EGR4Q05215 589 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 MAPK11Q15759 364 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 PDCD2Q16342 344 aaPredicted RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 GSG1Q2KHT4 349 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 TRMT5Q32P41 509 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 LIN52Q52LA3 116 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 SPANXN4Q5MJ08 99 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 RNF130Q86XS8 419 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 PEX5LQ8IYB4 626 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 LRRC34Q8IZ02 419 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 TRIML2Q8N7C3 387 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 OR4M2Q8NGB6 313 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 EPS8L3Q8TE67 593 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 ANP32BQ92688 251 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 RAB39BQ96DA2 213 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 LRR1Q96L50 414 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 OXGR1Q96P68 337 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 OR2M2Q96R28 347 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 SLC6A7Q99884 636 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 ZNF665Q9H7R5 613 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 NTN4Q9HB63 628 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 RLIMQ9NVW2 624 aa7.01□□□□□ -1.29
USP39-216ENST00000490193 MYEF2Q9P2K5 600 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 ZNF346Q9UL40 294 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
USP39-216ENST00000490193 CCDC154A6NI56 674 aa7□□□□□ -1.29
USP39-216ENST00000490193 E9PBE3 544 aa7□□□□□ -1.29
USP39-216ENST00000490193 PLPP2O43688 288 aa7□□□□□ -1.29
USP39-216ENST00000490193 MPZL1O95297 269 aa7□□□□□ -1.29
USP39-216ENST00000490193 IGHV2-5P01817 119 aa7□□□□□ -1.29
USP39-216ENST00000490193 HLA-HP01893 362 aa7□□□□□ -1.29
USP39-216ENST00000490193 NR2F1P10589 423 aa7□□□□□ -1.29
USP39-216ENST00000490193 PRG2P13727 222 aa7□□□□□ -1.29
USP39-216ENST00000490193 ADRA2CP18825 462 aa7□□□□□ -1.29
USP39-216ENST00000490193 TCN1P20061 433 aaPredicted RBP7□□□□□ -1.29
USP39-216ENST00000490193 LRRC74AQ0VAA2 488 aa7□□□□□ -1.29
USP39-216ENST00000490193 MAD2L1BPQ15013 274 aaPredicted RBP7□□□□□ -1.29
USP39-216ENST00000490193 OCLNQ16625 522 aa7□□□□□ -1.29
USP39-216ENST00000490193 ZNF311Q5JNZ3 666 aa7□□□□□ -1.29
USP39-216ENST00000490193 PHYHD1Q5SRE7 291 aa7□□□□□ -1.29
USP39-216ENST00000490193 C5orf46Q6UWT4 87 aa7□□□□□ -1.29
USP39-216ENST00000490193 C6orf89Q6UWU4 347 aa7□□□□□ -1.29
USP39-216ENST00000490193 ZNF836Q6ZNA1 936 aa7□□□□□ -1.29
USP39-216ENST00000490193 LRP11Q86VZ4 500 aa7□□□□□ -1.29
USP39-216ENST00000490193 VRK2Q86Y07 508 aa7□□□□□ -1.29
USP39-216ENST00000490193 KDM8Q8N371 416 aa7□□□□□ -1.29
USP39-216ENST00000490193 CADM2Q8N3J6 435 aa7□□□□□ -1.29
USP39-216ENST00000490193 BPIFB2Q8N4F0 458 aa7□□□□□ -1.29
USP39-216ENST00000490193 EIF1ADQ8N9N8 165 aaKnown RBP7□□□□□ -1.29
USP39-216ENST00000490193 ADPRHL1Q8NDY3 354 aa7□□□□□ -1.29
USP39-216ENST00000490193 OR52P1PQ8NH57 321 aa7□□□□□ -1.29
USP39-216ENST00000490193 NANPQ8TBE9 248 aa7□□□□□ -1.29
USP39-216ENST00000490193 DVL3Q92997 716 aaPredicted RBP7□□□□□ -1.29
USP39-216ENST00000490193 SLC35B4Q969S0 331 aa7□□□□□ -1.29
USP39-216ENST00000490193 C16orf45Q96MC5 204 aaPredicted RBP7□□□□□ -1.29
USP39-216ENST00000490193 AKTIPQ9H8T0 292 aa7□□□□□ -1.29
USP39-216ENST00000490193 ZMAT3Q9HA38 289 aaKnown RBP7□□□□□ -1.29
USP39-216ENST00000490193 C12orf10Q9HB07 376 aa7□□□□□ -1.29
USP39-216ENST00000490193 DDX28Q9NUL7 540 aaKnown RBP7□□□□□ -1.29
USP39-216ENST00000490193 NKIRAS2Q9NYR9 191 aa7□□□□□ -1.29
USP39-216ENST00000490193 ZNF224Q9NZL3 707 aa7□□□□□ -1.29
USP39-216ENST00000490193 CALML5Q9NZT1 146 aa7□□□□□ -1.29
USP39-216ENST00000490193 SLC17A7Q9P2U7 560 aa7□□□□□ -1.29
USP39-216ENST00000490193 SEC14L4Q9UDX3 406 aa7□□□□□ -1.29
USP39-216ENST00000490193 SLC7A8Q9UHI5 535 aa7□□□□□ -1.29
USP39-216ENST00000490193 FBXL3Q9UKT7 428 aa7□□□□□ -1.29
USP39-216ENST00000490193 ZNF443Q9Y2A4 671 aaPredicted RBP7□□□□□ -1.29
USP39-216ENST00000490193 CHST2Q9Y4C5 530 aa7□□□□□ -1.29
USP39-216ENST00000490193 NOX1Q9Y5S8 564 aa7□□□□□ -1.29
USP39-216ENST00000490193 TANC2Q9HCD6 1990 aa7□□□□□ -1.29
USP39-216ENST00000490193 IGLV3-9A0A075B6K5 115 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 SMIM23A6NLE4 172 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 C17orf100A8MU93 164 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 M0R082 166 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 AIM2O14862 343 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 OR2T1O43869 369 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 SEC14L2O76054 403 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 PRSS23O95084 383 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 BPGMP07738 259 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 NAT2P11245 290 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 PRTN3P24158 256 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 FPR2P25090 351 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 GTF2E2P29084 291 aaKnown RBP6.99□□□□□ -1.29
USP39-216ENST00000490193 S100A3P33764 101 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 CRYBB2P43320 205 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 RPS5P46782 204 aaKnown RBP6.99□□□□□ -1.29
USP39-216ENST00000490193 CAPZA2P47755 286 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 MVDP53602 400 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 GALK2Q01415 458 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 C1DQ13901 141 aaKnown RBP6.99□□□□□ -1.29
USP39-216ENST00000490193 PCGF3Q3KNV8 242 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 COX20Q5RI15 118 aa6.99□□□□□ -1.29
USP39-216ENST00000490193 FAM69AQ5T7M9 428 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms