RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 CCDC36Q8IYA8 594 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 C20orf196Q8IYI0 205 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ANKS4BQ8N8V4 417 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 BCAS4Q8TDM0 211 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 HS6ST2Q96MM7 605 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF75AQ96N20 296 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 MOGAT1Q96PD6 335 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 ALKBH3Q96Q83 286 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC38A2Q96QD8 506 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 CCT8L2Q96SF2 557 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 TMEM27Q9HBJ8 222 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 GPR35Q9HC97 309 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 MRGBPQ9NV56 204 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 B3GNT2Q9NY97 397 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 RPS6KB2Q9UBS0 482 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 TRIM33Q9UPN9 1127 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 MOKQ9UQ07 419 aa8.46□□□□□ -1.06
TMEM39A-210ENST00000490099 A0A0G2JND7 137 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 FXYD1O00168 92 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 FBP2O00757 339 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 PLPP3O14495 311 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 CD5LO43866 347 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 SNX3O60493 162 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC43A1O75387 559 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 PDE5AO76074 875 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 MT-ATP6P00846 226 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 CECR9P0C854 216 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 CDH2P19022 906 aaPredicted RBP8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 CD247P20963 164 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 PCSK6P29122 969 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 AQP1P29972 269 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 EFNA4P52798 201 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 ARFIP2P53365 341 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 RGS8P57771 180 aaPredicted RBP8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 MTPNP58546 118 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 NAAAQ02083 359 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 HGFACQ04756 655 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 LOXL1Q08397 574 aaPredicted RBP8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 COQ5Q5HYK3 327 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 PHYHD1Q5SRE7 291 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 HMBOX1Q6NT76 420 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 KLHL24Q6TFL4 600 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 DHDDSQ86SQ9 333 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 WDFY1Q8IWB7 410 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 SLC30A8Q8IWU4 369 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 MAPK1IP1LQ8NDC0 245 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 PIK3C3Q8NEB9 887 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 OR4D11Q8NGI4 311 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 OR6T1Q8NGN1 323 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 C10orf105Q8TEF2 133 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 NANOS1Q8WY41 292 aaKnown RBP8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 TAMM41Q96BW9 452 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 EPYCQ99645 322 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 ELAC2Q9BQ52 826 aaKnown RBP8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 POU2F3Q9UKI9 436 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 ANGPT4Q9Y264 503 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 NOX1Q9Y5S8 564 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 ATP23Q9Y6H3 246 aa8.45□□□□□ -1.06
TMEM39A-210ENST00000490099 RTTNQ86VV8 2226 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF503-AS2A6NEH8 195 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 KIAA1324LA8MWY0 1029 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ZNF99A8MXY4 864 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 VWC2LB2RUY7 222 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ANGPT2O15123 496 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CHP2O43745 196 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 SSX4O60224 188 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 KRT33AO76009 404 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 NPPAP01160 153 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 BMP4P12644 408 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 HLA-DOBP13765 273 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 PCGF2P35227 344 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ARR3P36575 388 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 SERPINF1P36955 418 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 UBE2NP61088 152 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CHRNB3Q05901 458 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ZP4Q12836 540 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 C1DQ13901 141 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 RAB35Q15286 201 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 ADIPOQQ15848 244 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 VMACQ2NL98 169 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CEACAM16Q2WEN9 425 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 NANOGP8Q6NSW7 305 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 WDR88Q6ZMY6 472 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 PIGWQ7Z7B1 504 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 PATL1Q86TB9 770 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 RANBP3LQ86VV4 465 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 HIPK1Q86Z02 1210 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 SMYD1Q8NB12 490 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 CCDC197Q8NCU1 140 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 NUP37Q8NFH4 326 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 IL17RDQ8NFM7 739 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 OR4F15Q8NGB8 312 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 PROX1Q92786 737 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 THOC1Q96FV9 657 aaKnown RBP8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 TXNDC15Q96J42 360 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 DOK1Q99704 481 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 MCHR1Q99705 422 aa8.44□□□□□ -1.06
TMEM39A-210ENST00000490099 RHNO1Q9BSD3 238 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms