RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SYNGR3O43761 229 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 SNNO75324 88 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-216ENST00000489927 CD79AP11912 226 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 HLA-DOBP13765 273 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 EVX1P49640 407 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 AQP5P55064 265 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 PIGFQ07326 219 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 GSG1Q2KHT4 349 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 MS4A18Q3C1V0 323 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 SLC9B1Q4ZJI4 515 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 ELFN2Q5R3F8 820 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 HHATQ5VTY9 493 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 C5orf46Q6UWT4 87 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 MSANTD1Q6ZTZ1 278 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 NET1Q7Z628 596 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-216ENST00000489927 COMTD1Q86VU5 262 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 CARM1Q86X55 608 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 UEVLDQ8IX04 471 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 C20orf196Q8IYI0 205 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 LSMEM1Q8N8F7 131 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 ANKRD42Q8N9B4 389 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 BBS10Q8TAM1 723 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 TRIM44Q96DX7 344 aaPredicted RBP13.66□□□□□ -0.22
PLOD3-216ENST00000489927 MAELQ96JY0 434 aaKnown RBP13.66□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF75AQ96N20 296 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 EMC6Q9BV81 110 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 KLHL14Q9P2G3 628 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 METRNQ9UJH8 293 aa13.66□□□□□ -0.22
PLOD3-216ENST00000489927 HPXP02790 462 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 BMP2P12643 396 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF35P13682 527 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 NQO1P15559 274 aaKnown RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF14P17017 642 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 TCN1P20061 433 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 PCMT1P22061 227 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 COL8A2P25067 703 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 PRKAR1BP31321 381 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 WDR4P57081 412 aaKnown RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ALG10BQ5I7T1 473 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 CEP85LQ5SZL2 805 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 SLC2A7Q6PXP3 512 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF813Q6ZN06 617 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF627Q7L945 461 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 MAVSQ7Z434 540 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 GLCCI1Q86VQ1 547 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 WDFY1Q8IWB7 410 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ADPRHL1Q8NDY3 354 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 GTF2H4Q92759 462 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 SLC41A3Q96GZ6 507 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 SYT3Q9BQG1 590 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 PAIP1Q9H074 479 aaKnown RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 MS4A5Q9H3V2 200 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 NARFLQ9H6Q4 476 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 METTL17Q9H7H0 456 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 ZNF224Q9NZL3 707 aa13.65□□□□□ -0.22
PLOD3-216ENST00000489927 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 V9GYY5 206 aaPredicted RBP13.65□□□□□ -0.22
PLOD3-216ENST00000489927 A0A087WUJ7 227 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 C5orf58C9J3I9 102 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 SLCO1B7G3V0H7 640 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 CLIC1O00299 241 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 VENTXO95231 258 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 ETS2P15036 469 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 B4GALT1P15291 398 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 CFPP27918 469 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 GLRXP35754 106 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 GPR6P46095 362 aaPredicted RBP13.64□□□□□ -0.23
PLOD3-216ENST00000489927 SEC24CP53992 1094 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 RUNX1T1Q06455 604 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 FADDQ13158 208 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 MFSD13AQ14CX5 517 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 TRMT5Q32P41 509 aaKnown RBP13.64□□□□□ -0.23
PLOD3-216ENST00000489927 ULK3Q6PHR2 472 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 C12orf54Q6X4T0 127 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 LRP11Q86VZ4 500 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 CLDND2Q8NHS1 167 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 DNAJA4Q8WW22 397 aaPredicted RBP13.64□□□□□ -0.23
PLOD3-216ENST00000489927 TMEM186Q96B77 213 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 TXNDC15Q96J42 360 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 LRR1Q96L50 414 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 OR52B2Q96RD2 323 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 RACGAP1Q9H0H5 632 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 LPAR2Q9HBW0 351 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 HIF1ANQ9NWT6 349 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 MED29Q9NX70 200 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 MYEF2Q9P2K5 600 aaKnown RBP13.64□□□□□ -0.23
PLOD3-216ENST00000489927 SPEF1Q9Y4P9 236 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 NOX1Q9Y5S8 564 aa13.64□□□□□ -0.23
PLOD3-216ENST00000489927 FAM157AC9JC47 383 aa13.63□□□□□ -0.23
PLOD3-216ENST00000489927 WNT9BO14905 357 aa13.63□□□□□ -0.23
PLOD3-216ENST00000489927 UBDO15205 165 aa13.63□□□□□ -0.23
PLOD3-216ENST00000489927 TPST1O60507 370 aa13.63□□□□□ -0.23
PLOD3-216ENST00000489927 HOXB9P17482 250 aaPredicted RBP13.63□□□□□ -0.23
PLOD3-216ENST00000489927 ACHEP22303 614 aa13.63□□□□□ -0.23
PLOD3-216ENST00000489927 GIPRP48546 466 aa13.63□□□□□ -0.23
PLOD3-216ENST00000489927 PTDSS1P48651 473 aaKnown RBP13.63□□□□□ -0.23
PLOD3-216ENST00000489927 CAMK2DQ13557 499 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms