RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 UGT1A10Q9HAW8 530 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 UGT1A8Q9HAW9 530 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 SLC40A1Q9NP59 571 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 CTPS2Q9NRF8 586 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF629Q9UEG4 869 aaPredicted RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 TET2Q6N021 2002 aaPredicted RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 NFASCO94856 1347 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 PCM1Q15154 2024 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 COLCA2A8K830 154 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 HEXBP07686 556 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 IL12AP29459 219 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 UBE2AP49459 152 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 NCBP2P52298 156 aaKnown RBP eCLIP2.75□□□□□ -1.97
CCDC39-206ENST00000489868 CRYBB1P53674 252 aaPredicted RBP2.75□□□□□ -1.97
CCDC39-206ENST00000489868 HMGCS1Q01581 520 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 DPYSL2Q16555 572 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 SFT2D3Q587I9 215 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 LINC00173Q6ZV60 143 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 VSTM4Q8IW00 320 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 TTC5Q8N0Z6 440 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 C15orf56Q8N910 161 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 MFSD9Q8NBP5 474 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 OR2T3Q8NH03 318 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 FAM110BQ8TC76 370 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 CD300LFQ8TDQ1 290 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 BMFQ96LC9 184 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 KCNIP3Q9Y2W7 256 aa2.75□□□□□ -1.97
CCDC39-206ENST00000489868 RPAP1Q9BWH6 1393 aaPredicted RBP2.74□□□□□ -1.97
CCDC39-206ENST00000489868 IGKV1D-13A0A0B4J2D9 117 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 PRSS37A4D1T9 235 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 K7EQM0 130 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 MED7O43513 233 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 PEX11AO75192 247 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 CSF3P09919 207 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 RHOXF2BP0C7M4 288 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 IGKV1-13P0DP09 117 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 CCDC130P13994 396 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 OPRD1P41143 372 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 DUSP3P51452 185 aaPredicted RBP2.74□□□□□ -1.97
CCDC39-206ENST00000489868 IRX3P78415 501 aaPredicted RBP2.74□□□□□ -1.97
CCDC39-206ENST00000489868 ECHDC2Q86YB7 292 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF679Q8IYX0 411 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 EMG1Q92979 244 aaKnown RBP2.74□□□□□ -1.97
CCDC39-206ENST00000489868 CLCC1Q96S66 551 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF607Q96SK3 696 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 GBA3Q9H227 469 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 RIBC2Q9H4K1 309 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 RMND5AQ9H871 391 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 NOX3Q9HBY0 568 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 TMCO1Q9UM00 188 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 WIF1Q9Y5W5 379 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 PNPLA6Q8IY17 1366 aa2.74□□□□□ -1.97
CCDC39-206ENST00000489868 MN1Q10571 1320 aaPredicted RBP2.73□□□□□ -1.97
CCDC39-206ENST00000489868 OR5B21A6NL26 309 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 ANGPT2O15123 496 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 POLR2DO15514 142 aaKnown RBP2.73□□□□□ -1.97
CCDC39-206ENST00000489868 BGLAPP02818 100 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 NCK1P16333 377 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 OMGP23515 440 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 CCR1P32246 355 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 NPBWR2P48146 333 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 CDK16Q00536 496 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 OR4F3Q6IEY1 312 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 SLC25A24Q6NUK1 477 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 RNF182Q8N6D2 247 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 FNDC5Q8NAU1 212 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 SMARCD2Q92925 531 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 WFIKKN1Q96NZ8 548 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 SPIN2AQ99865 258 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 SPIN2BQ9BPZ2 258 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 ING2Q9H160 280 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 CARMIL3Q8ND23 1372 aa2.73□□□□□ -1.97
CCDC39-206ENST00000489868 FANCIQ9NVI1 1328 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 ATP10AO60312 1499 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 SERPINE3A8MV23 424 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 ZDHHC11BP0C7U3 371 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 STK11Q15831 433 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 CCDC92Q53HC0 331 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-206ENST00000489868 VAX1Q5SQQ9 334 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 PDZK1Q5T2W1 519 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 LYPD1Q8N2G4 141 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 GMCL1P1Q8NEA9 526 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 MAGEE2Q8TD90 523 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-206ENST00000489868 THRSPQ92748 146 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF578Q96N58 590 aaPredicted RBP2.72□□□□□ -1.97
CCDC39-206ENST00000489868 FAIM2Q9BWQ8 316 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 SIRT7Q9NRC8 400 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF222Q9UK12 451 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 CABIN1Q9Y6J0 2220 aa2.72□□□□□ -1.97
CCDC39-206ENST00000489868 A0A1B0GVX0 72 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 HSMCR30P0CW71 290 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 PGAM1P18669 254 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 PSMA5P28066 241 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 TTLL9Q3SXZ7 439 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 FILIP1LQ4L180 1135 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 Q5W150 140 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 CNIH2Q6PI25 160 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 DHDDSQ86SQ9 333 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 PGAM4Q8N0Y7 254 aa2.71□□□□□ -1.98
CCDC39-206ENST00000489868 STPG2Q8N412 459 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms