RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 ETS2P15036 469 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 IGFBP3P17936 291 aaPredicted RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 GDI1P31150 447 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 HNRNPH3P31942 346 aaKnown RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 OPRD1P41143 372 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 TPMTP51580 245 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 TAS2R19P59542 299 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 HMGN5P82970 282 aaKnown RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 ENPEPQ07075 957 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 GK3PQ14409 553 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 MICBQ29980 383 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 KLHL38Q2WGJ6 581 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 FILIP1LQ4L180 1135 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 PAGE3Q5JUK9 113 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 KPRPQ5T749 579 aaPredicted RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 CTRB2Q6GPI1 263 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 ENPP6Q6UWR7 440 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 TMIGD1Q6UXZ0 262 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 ABHD12BQ7Z5M8 362 aaPredicted RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 SLC26A11Q86WA9 606 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 PNKDQ8N490 385 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 FAM83FQ8NEG4 500 aaPredicted RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 OR6C4Q8NGE1 309 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 ZNF596Q8TC21 504 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 FAM151AQ8WW52 585 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 TUBGCP3Q96CW5 907 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 CXorf40BQ96DE9 158 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 TM4SF19Q96DZ7 209 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 FOPNLQ96NB1 174 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 KCNA7Q96RP8 456 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 CLCC1Q96S66 551 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 NRIP2Q9BQI9 281 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 NAT9Q9BTE0 207 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 OR11A1Q9GZK7 315 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 RNF167Q9H6Y7 350 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 ZFP14Q9HCL3 533 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 TM9SF3Q9HD45 589 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 NMRK1Q9NWW6 199 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 HOXC10Q9NYD6 342 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 BFARQ9NZS9 450 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 SEC14L3Q9UDX4 400 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 MTRF1LQ9UGC7 380 aaKnown RBP1.5□□□□□ -2.17
CPSF3-205ENST00000489629 PIGLQ9Y2B2 252 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 IKBKGQ9Y6K9 419 aa1.5□□□□□ -2.17
CPSF3-205ENST00000489629 KANK1Q14678 1352 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 PCP4L1A6NKN8 68 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 OR5B21A6NL26 309 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 GJE1A6NN92 205 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ZNF716A6NP11 495 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 PES1O00541 588 aaKnown RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 MOSP00540 346 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 P04436 131 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 KLK3P07288 261 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ZNF735P0CB33 412 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ICAM2P13598 275 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ADRB3P13945 408 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ATP1B2P14415 290 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 IL12AP29459 219 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 GLP1RP43220 463 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 VDAC2P45880 294 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 GSSP48637 474 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ARRB1P49407 418 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 GPM6AP51674 278 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 DLX1P56177 255 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 PRPS1P60891 318 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ACTR3P61158 418 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 CCNA1P78396 465 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 IRX3P78415 501 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 PPIL2Q13356 520 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 PLD1Q13393 1074 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 OR5I1Q13606 314 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 GGTLC2Q14390 218 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ATP6AP1Q15904 470 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 NRF1Q16656 503 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 DGUOKQ16854 277 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 CTSL3PQ5NE16 218 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 MARCH8Q5T0T0 291 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 FAM71E1Q6IPT2 247 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 KDM7AQ6ZMT4 941 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 Q6ZN92 141 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ACP7Q6ZNF0 438 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ZNF571Q7Z3V5 609 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 FAM228AQ86W67 206 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 CDR2LQ86X02 465 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 RALGPS2Q86X27 583 aaPredicted RBP1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ECHDC2Q86YB7 292 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 MFSD6LQ8IWD5 586 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 RNF182Q8N6D2 247 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 OR56B2PQ8NGI1 322 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 OR1L6Q8NGR2 347 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 OR9G1Q8NH87 305 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 ARPC1AQ92747 370 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 FCRL1Q96LA6 429 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 FMO2Q99518 471 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 SLC39A3Q9BRY0 314 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 TCHPQ9BT92 498 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 GPR61Q9BZJ8 451 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 DEFB127Q9H1M4 99 aa1.49□□□□□ -2.17
CPSF3-205ENST00000489629 NEUROG2Q9H2A3 272 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms