RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PPP1R35Q8TAP8 253 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 C1orf123Q9NWV4 160 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 CAMK2AQ9UQM7 478 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 NME7Q9Y5B8 376 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 RGPD5Q99666 1765 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 TMED7-TICAM2A0A0A6YYA0 188 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 TRDV1A0A1B0GX56 115 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 ANXA7P20073 488 aaKnown RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 IL2RGP31785 369 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 GP2P55259 537 aaKnown RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 BDH1Q02338 343 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 MFGE8Q08431 387 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 MEP1BQ16820 701 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 MRPL41Q8IXM3 137 aaKnown RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 RBMXL1Q96E39 390 aaKnown RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 WASH6PQ9NQA3 447 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 TMED7Q9Y3B3 224 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 TOR1AO14656 332 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 NSA2O95478 260 aaKnown RBP16.27■□□□□ 0.2
NPHP4-209ENST00000489180 SRMP19623 302 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 RAB5CP51148 216 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 HCCSP53701 268 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 KIAA1024LP59773 190 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 DCAF7P61962 342 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 IKZF1Q13422 519 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 ZMAT1Q5H9K5 638 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 NPSR1Q6W5P4 371 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 PXT1Q8NFP0 134 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 FGGYQ96C11 551 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 LRRC46Q96FV0 321 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 DHCR7Q9UBM7 475 aaKnown RBP16.27■□□□□ 0.2
NPHP4-209ENST00000489180 FBXO7Q9Y3I1 522 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 TEAD1P28347 426 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 ERVFC1P60507 584 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 RACK1P63244 317 aaKnown RBP16.27■□□□□ 0.2
NPHP4-209ENST00000489180 SHEQ5VZ18 495 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 SLC48A1Q6P1K1 146 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 NKAIN4Q8IVV8 208 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 CPNE4Q96A23 557 aaPredicted RBP16.27■□□□□ 0.2
NPHP4-209ENST00000489180 ATP13A2Q9NQ11 1180 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 SLC23A2Q9UGH3 650 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 KIF25Q9UIL4 384 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 NUP98P52948 1817 aa16.27■□□□□ 0.2
NPHP4-209ENST00000489180 NSG1A0A0A6YYJ2 146 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 C2orf72A6NCS6 295 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 SLCO2B1O94956 709 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 F11P03951 625 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 GLYATL3Q5SZD4 288 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 PDCD1LG2Q9BQ51 273 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 UBQLN3Q9H347 655 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 ONECUT3O60422 494 aaPredicted RBP16.27■□□□□ 0.19
NPHP4-209ENST00000489180 MTHFD2P13995 350 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 CSNK1G2P78368 415 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 CLINT1Q14677 625 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 TANGO2Q6ICL3 276 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 PAQR6Q6TCH4 344 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 NANOGP1Q8N7R0 232 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 PTTG3PQ9NZH4 202 aa16.27■□□□□ 0.19
NPHP4-209ENST00000489180 PLPP1O14494 284 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 MRPL33O75394 65 aaKnown RBP16.26■□□□□ 0.19
NPHP4-209ENST00000489180 DBPQ10586 325 aaPredicted RBP16.26■□□□□ 0.19
NPHP4-209ENST00000489180 FOXB2Q5VYV0 432 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 SLC22A25Q6T423 547 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 OR14A16Q8NHC5 309 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 SLCO4A1Q96BD0 722 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 POFUT1Q9H488 388 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 RPH3ALQ9UNE2 315 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 NTNG1Q9Y2I2 539 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 HCRTR1O43613 425 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 ADAM23O75077 832 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 DPY19L2P2Q6ZN68 376 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 SYT9Q86SS6 491 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 PPP1R3BQ86XI6 285 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 FAM3DQ96BQ1 224 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 EMC7Q9NPA0 242 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 TRAV36DV7A0A075B6V5 113 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 TSTD3H0UI37 97 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 TUSC2O75896 110 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 PCBD1P61457 104 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 ACSM1Q08AH1 577 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 MARCH3Q86UD3 253 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 KDM8Q8N371 416 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 DCLRE1CQ96SD1 692 aaKnown RBP16.26■□□□□ 0.19
NPHP4-209ENST00000489180 P2RY12Q9H244 342 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 SH3BGRL2Q9UJC5 107 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 ASB1Q9Y576 335 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 CCSO14618 274 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 NUDT1P36639 197 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 ACTBL2Q562R1 376 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 ZNF684Q5T5D7 378 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 K7ESM1 405 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 SCRG1O75711 98 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 TNFRSF4P43489 277 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 LYSMD4Q5XG99 296 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 MFSD12Q6NUT3 480 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 FRMD1Q8N878 549 aa16.26■□□□□ 0.19
NPHP4-209ENST00000489180 RBPMSQ93062 196 aaKnown RBP16.26■□□□□ 0.19
NPHP4-209ENST00000489180 FYTTD1Q96QD9 318 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms