RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IGFBP1P08833 259 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-231ENST00000488905 NQO1P15559 274 aaKnown RBP15.91■□□□□ 0.14
HDAC6-231ENST00000488905 APEX1P27695 318 aaKnown RBP15.91■□□□□ 0.14
HDAC6-231ENST00000488905 IL2RGP31785 369 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 NCALDP61601 193 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 ADRM1Q16186 407 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 PHYHD1Q5SRE7 291 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 GCNT6Q5T4J0 391 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 CARD17Q5XLA6 110 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 FAM91A1Q658Y4 838 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 DHRS4L2Q6PKH6 230 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 MSRB3Q8IXL7 192 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 C20orf196Q8IYI0 205 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 ZNF786Q8N393 782 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 HPS1Q92902 700 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 SNX18Q96RF0 628 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 CORINQ9Y5Q5 1042 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 A0A087WUJ7 227 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 SH3PXD2BA1X283 911 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 HPRP00739 348 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 HLA-DOBP13765 273 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 MRPL19P49406 292 aaKnown RBP15.9■□□□□ 0.14
HDAC6-231ENST00000488905 STX1BP61266 288 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 MAGOHP61326 146 aaKnown RBP15.9■□□□□ 0.14
HDAC6-231ENST00000488905 POU3F1Q03052 451 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-231ENST00000488905 MFSD13AQ14CX5 517 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 LRIF1Q5T3J3 769 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 REEP3Q6NUK4 255 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 ULK3Q6PHR2 472 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 KRT73Q86Y46 540 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 C10orf111Q8N326 155 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 UBASH3BQ8TF42 649 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 SLC47A1Q96FL8 570 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 SLC41A3Q96GZ6 507 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 EMC6Q9BV81 110 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 SPATA5L1Q9BVQ7 753 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 B3GNT2Q9NY97 397 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 CMAHPQ9Y471 501 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 USH1CQ9Y6N9 552 aa15.9■□□□□ 0.14
HDAC6-231ENST00000488905 MS4A18H0YCH9 400 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 TPST1O60507 370 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 HLA-HP01893 362 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 BGLAPP02818 100 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 ADRA2AP08913 450 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 IFNGR1P15260 489 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 NR4A1P22736 598 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 RGS8P57771 180 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-231ENST00000488905 CDK6Q00534 326 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 RIN1Q13671 783 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 GSG1Q2KHT4 349 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 MS4A18Q3C1V0 323 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 EPGNQ6UW88 154 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 SCAIQ8N9R8 606 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 LINC01356Q8N9X3 169 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 OR6S1Q8NH40 331 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 MS4A3Q96HJ5 214 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 LRR1Q96L50 414 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 EPYCQ99645 322 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 ASPNQ9BXN1 380 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 TPK1Q9H3S4 243 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 B3GAT2Q9NPZ5 323 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 MED29Q9NX70 200 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 SELENONQ9NZV5 590 aa15.89■□□□□ 0.13
HDAC6-231ENST00000488905 A0A0B4J2E0 115 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 A0A1B0GX12 115 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 HAX1O00165 279 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 POLR3GO15318 223 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-231ENST00000488905 CD79AP11912 226 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 B4GALT1P15291 398 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF14P17017 642 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-231ENST00000488905 PPIBP23284 216 aaKnown RBP15.88■□□□□ 0.13
HDAC6-231ENST00000488905 CDH15P55291 814 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 PUDPQ08623 228 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 TRIP10Q15642 601 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 MSMPQ1L6U9 139 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF813Q6ZN06 617 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 ZNF627Q7L945 461 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 RNF217Q8TC41 542 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 MRPL24Q96A35 216 aaKnown RBP15.88■□□□□ 0.13
HDAC6-231ENST00000488905 TLCD1Q96CP7 247 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 MOGAT1Q96PD6 335 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 MRPL37Q9BZE1 423 aaKnown RBP15.88■□□□□ 0.13
HDAC6-231ENST00000488905 ULBP2Q9BZM5 246 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 TCF7L2Q9NQB0 619 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 SLAMF8Q9P0V8 285 aa15.88■□□□□ 0.13
HDAC6-231ENST00000488905 PRORSD1PA6NEY8 169 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 LYNX1G3V0Z9 82 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 M0R233 179 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 SYNGR3O43761 229 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 LYNX1P0DP58 116 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 EVX1P49640 407 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 SCARB2Q14108 478 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 OR1Q1Q15612 314 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 LIPNQ5VXI9 398 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 BLOC1S3Q6QNY0 202 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 FUNDC1Q8IVP5 155 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 WDFY1Q8IWB7 410 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 RFLNBQ8N5W9 214 aa15.87■□□□□ 0.13
HDAC6-231ENST00000488905 SPDL1Q96EA4 605 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms