RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 KPNA4O00629 521 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 AQP7O14520 342 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 HTR2AP28223 471 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 CD40LGP29965 261 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 RAB40BQ12829 278 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 IGFBP7Q16270 282 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 SLC25A53Q5H9E4 307 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ARHGAP11AQ6P4F7 1023 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 MINDY2Q8NBR6 621 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ST6GALNAC3Q8NDV1 305 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ZNF563Q8TA94 476 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ST8SIA1Q92185 356 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ABTB1Q969K4 478 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 SFXN2Q96NB2 322 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 CDADC1Q9BWV3 514 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 SEC14L4Q9UDX3 406 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 CLEC2DQ9UHP7 191 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 TRAPPC13A5PLN9 417 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 FAM47E-STBD1D6RA91 191 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 MYL12BO14950 172 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 OCM2P0CE71 109 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 OCMP0CE72 109 aaPredicted RBP17.4■□□□□ 0.38
CCM2-216ENST00000488727 ZNF17P17021 662 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 BMP7P18075 431 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 IL11P20809 199 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 C19orf57Q0VDD7 668 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 C1DQ13901 141 aaKnown RBP17.4■□□□□ 0.38
CCM2-216ENST00000488727 VASNQ6EMK4 673 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 ZNF620Q6ZNG0 422 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 MRGPRX4Q96LA9 322 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 PIGQQ9BRB3 760 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 TEX12Q9BXU0 123 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 MROQ9BYG7 248 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 ZNF337Q9Y3M9 751 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 CDH10Q9Y6N8 788 aa17.4■□□□□ 0.38
CCM2-216ENST00000488727 EFNA2O43921 213 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 STARP49675 285 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 PPP5CP53041 499 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 DLX5P56178 289 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 CRYZQ08257 329 aaKnown RBP17.39■□□□□ 0.37
CCM2-216ENST00000488727 NRMQ8IXM6 262 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 RNF113BQ8IZP6 322 aaKnown RBP17.39■□□□□ 0.37
CCM2-216ENST00000488727 TMEM255BQ8WV15 326 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 PRSS27Q9BQR3 290 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 SIAEQ9HAT2 523 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 ISYNA1Q9NPH2 558 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 NDUFB11Q9NX14 153 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 SLC7A7Q9UM01 511 aa17.39■□□□□ 0.37
CCM2-216ENST00000488727 RP1L1Q8IWN7 2480 aaPredicted RBP17.39■□□□□ 0.37
CCM2-216ENST00000488727 TMEM129A0AVI4 362 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 GPX5O75715 221 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 LYPD3O95274 346 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 EIF1P41567 113 aaKnown RBP17.38■□□□□ 0.37
CCM2-216ENST00000488727 MRPL49Q13405 166 aaKnown RBP17.38■□□□□ 0.37
CCM2-216ENST00000488727 OXA1LQ15070 435 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 MEX3DQ86XN8 651 aaKnown RBP17.38■□□□□ 0.37
CCM2-216ENST00000488727 CADM2Q8N3J6 435 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 OR4Q3Q8NH05 313 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 TMEM234Q8WY98 164 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 TIMP4Q99727 224 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 RNF167Q9H6Y7 350 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 NPIPA2E9PIF3 369 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 NPIPA3F8WFD2 350 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 H3BML4 177 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 SURF4O15260 269 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 PIP5K1CO60331 668 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 GP1BBP13224 206 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 ADH6P28332 368 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 PTGS2P35354 604 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 SLC1A3P43003 542 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 PGGHGQ32M88 737 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 ANKK1Q8NFD2 765 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 OR9Q1Q8NGQ5 310 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 STUB1Q9UNE7 303 aa17.38■□□□□ 0.37
CCM2-216ENST00000488727 EXOSC1Q9Y3B2 195 aaKnown RBP17.38■□□□□ 0.37
CCM2-216ENST00000488727 RELNP78509 3460 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 OR14I1A6ND48 311 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 ACTL6AO96019 429 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 SOX6P35712 828 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 GPR4P46093 362 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 LHX2P50458 406 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 COPZ1P61923 177 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 PRKCDQ05655 676 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 C3AR1Q16581 482 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 AADACL4Q5VUY2 407 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 WBP2NLQ6ICG8 309 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 POMZP3Q6PJE2 187 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 GRINAQ7Z429 371 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 LSMEM1Q8N8F7 131 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 RFKQ969G6 155 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 RNFT2Q96EX2 444 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 ADAM19Q9H013 955 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 TMEM185BQ9H7F4 350 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 ZNF835Q9Y2P0 537 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 PEX16Q9Y5Y5 336 aa17.37■□□□□ 0.37
CCM2-216ENST00000488727 A0A075B6Q4 140 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 SLC19A2O60779 497 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 HMGN1P05114 100 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 MYL12AP19105 171 aa17.36■□□□□ 0.37
CCM2-216ENST00000488727 PSMA1P25786 263 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms