RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ZGRF1Q86YA3 2104 aa9.16□□□□□ -0.94
SKA1-204ENST00000488454 SPENQ96T58 3664 aaKnown RBP9.15□□□□□ -0.94
SKA1-204ENST00000488454 TRAV27A0A087WT01 109 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 ZNF716A6NP11 495 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 CDC42EP2O14613 210 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 AKAP8O43823 692 aaKnown RBP9.15□□□□□ -0.94
SKA1-204ENST00000488454 RAMP1O60894 148 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 FZD7O75084 574 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 SMNDC1O75940 238 aaKnown RBP eCLIP9.15□□□□□ -0.94
SKA1-204ENST00000488454 NDUFB2O95178 105 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 BMP5P22003 454 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 PRKACGP22612 351 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 AGTR1P30556 359 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 RPL4P36578 427 aaKnown RBP9.15□□□□□ -0.94
SKA1-204ENST00000488454 KIR2DL2P43627 348 aaPredicted RBP9.15□□□□□ -0.94
SKA1-204ENST00000488454 GSSP48637 474 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 P2RY4P51582 365 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 FOXF2Q12947 444 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 POU4F3Q15319 338 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 ALG10Q5BKT4 473 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 NCCRP1Q6ZVX7 275 aaPredicted RBP9.15□□□□□ -0.94
SKA1-204ENST00000488454 CREB3L2Q70SY1 520 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 AAED1Q7RTV5 226 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 TMEM179BQ7Z7N9 219 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 MRGPRGQ86SM5 289 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 ZNF100Q8IYN0 542 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 PQLC1Q8N2U9 271 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 OR6K3Q8NGY3 331 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 CA5BP1Q8WTZ4 195 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 LRRC46Q96FV0 321 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 GSX2Q9BZM3 304 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 UCK2Q9BZX2 261 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 C12orf49Q9H741 205 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 NTN4Q9HB63 628 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 INIPQ9NRY2 104 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 PROCRQ9UNN8 238 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 FLVCR1Q9Y5Y0 555 aa9.15□□□□□ -0.94
SKA1-204ENST00000488454 POLEQ07864 2286 aa9.15□□□□□ -0.95
SKA1-204ENST00000488454 ZNF462Q96JM2 2506 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 ESPL1Q14674 2120 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 SAC3D1A6NKF1 404 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 MCIDASD6RGH6 385 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 KLF4O43474 513 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 ZG16O60844 167 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 PTP4A3O75365 173 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 KRT33AO76009 404 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 BCL10O95999 233 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 ADAP00813 363 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 F13BP05160 661 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 AGAP20933 346 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 UQCRC1P31930 480 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 DAP3P51398 398 aaKnown RBP9.14□□□□□ -0.95
SKA1-204ENST00000488454 CLDN17P56750 224 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 CTXN1P60606 82 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 ADORA2A-AS1P86434 159 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 POU3F1Q03052 451 aaPredicted RBP9.14□□□□□ -0.95
SKA1-204ENST00000488454 RPL18Q07020 188 aaKnown RBP9.14□□□□□ -0.95
SKA1-204ENST00000488454 RCN1Q15293 331 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 ZNF770Q6IQ21 691 aaPredicted RBP9.14□□□□□ -0.95
SKA1-204ENST00000488454 HMBOX1Q6NT76 420 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 RPL13AP3Q6NVV1 102 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 SMARCD3Q6STE5 483 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 CASP12Q6UXS9 341 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 RASSF6Q6ZTQ3 369 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 HDDC2Q7Z4H3 204 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 EPHX4Q8IUS5 362 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 HS3ST5Q8IZT8 346 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 UBE2J2Q8N2K1 259 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 ZNF808Q8N4W9 903 aaPredicted RBP9.14□□□□□ -0.95
SKA1-204ENST00000488454 FAM26EQ8N5C1 309 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 NAXEQ8NCW5 288 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 MOSPD2Q8NHP6 518 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 DNAJC9Q8WXX5 260 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 APH1AQ96BI3 265 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 STARD4Q96DR4 205 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 GPA33Q99795 319 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 OSBPL10Q9BXB5 764 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 DGCR6LQ9BY27 220 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 DCLRE1BQ9H816 532 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 FANCFQ9NPI8 374 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 PLSCR4Q9NRQ2 329 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 UPB1Q9UBR1 384 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 SIGLEC7Q9Y286 467 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 NBASA2RRP1 2371 aa9.14□□□□□ -0.95
SKA1-204ENST00000488454 CFAP46Q8IYW2 2715 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 OR6C65A6NJZ3 312 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 EEF1E1-BLOC1S5C9J1V9 151 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 H3BN98 237 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 MSTNO14793 375 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 EEF1E1O43324 174 aaKnown RBP9.13□□□□□ -0.95
SKA1-204ENST00000488454 TNFSF13O75888 250 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 HPRP00739 348 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 TSPAN19P0C672 248 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 HLA-DOBP13765 273 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 ANPEPP15144 967 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 IFNGR1P15260 489 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 SLC6A6P31641 620 aa9.13□□□□□ -0.95
SKA1-204ENST00000488454 RPS6KA3P51812 740 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms