RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SERPINA2P20848 420 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 PSMA2P25787 234 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 KIF5BP33176 963 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 UGT1A5P35504 534 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 KIR2DS2P43631 304 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 CSNK1EP49674 416 aaKnown RBP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 MRPS11P82912 194 aaKnown RBP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 EIF4EBP2Q13542 120 aaPredicted RBP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 DPYSL3Q14195 570 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 PDK1Q15118 436 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 ZNF658BQ4V348 819 aaPredicted RBP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 WSCD1Q658N2 575 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 LRRC8BQ6P9F7 803 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 EID2Q8N6I1 236 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 VSTM2LQ96N03 204 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 SMR3AQ99954 134 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 SLC25A51Q9H1U9 297 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 ROPN1Q9HAT0 212 aaPredicted RBP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 ONECUT1Q9UBC0 465 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 ADAM28Q9UKQ2 775 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 VPS13CQ709C8 3753 aa2.92□□□□□ -1.94
ITGB1-214ENST00000488427 SF3B1O75533 1304 aaKnown RBP eCLIP2.92□□□□□ -1.94
ITGB1-214ENST00000488427 PLIN4Q96Q06 1357 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 TENM1Q9UKZ4 2725 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 OR6C65A6NJZ3 312 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 LRRC30A6NM36 301 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 ABCD4O14678 606 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 LATO43561 262 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 SCRG1O75711 98 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 KRT6AP02538 564 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 MT-ND3P03897 115 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 CSF2P04141 144 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 KRT6BP04259 564 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 HPNP05981 417 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 ETS1P14921 441 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 RPS2P15880 293 aaKnown RBP2.91□□□□□ -1.94
ITGB1-214ENST00000488427 GABRG2P18507 467 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 KRT6CP48668 564 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 PLK1P53350 603 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 RPL8P62917 257 aaKnown RBP2.91□□□□□ -1.94
ITGB1-214ENST00000488427 PPP2R5CQ13362 524 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 AANATQ16613 207 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 CDKN3Q16667 212 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 TOR1AIP1Q5JTV8 583 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 PVRIGQ6DKI7 326 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 WDR74Q6RFH5 385 aaPredicted RBP2.91□□□□□ -1.94
ITGB1-214ENST00000488427 CENPUQ71F23 418 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 MISPQ8IVT2 679 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 MKXQ8IYA7 352 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 BCORP1Q8N888 145 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 OR2A12Q8NGT7 310 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 OR9A4Q8NGU2 314 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 RNF138Q8WVD3 245 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 SLC5A11Q8WWX8 675 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 CATSPER2Q96P56 530 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 KCNK16Q96T55 309 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 EBF4Q9BQW3 602 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 FICDQ9BVA6 458 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 POLR3FQ9H1D9 316 aaPredicted RBP2.91□□□□□ -1.94
ITGB1-214ENST00000488427 AZI2Q9H6S1 392 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 ZDHHC11Q9H8X9 412 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 CAB39LQ9H9S4 337 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 VAT1LQ9HCJ6 419 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 FANCFQ9NPI8 374 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 MRPL39Q9NYK5 338 aaKnown RBP2.91□□□□□ -1.94
ITGB1-214ENST00000488427 TP53TG5Q9Y2B4 290 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 PLLPQ9Y342 182 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 SPACA6W5XKT8 324 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 RYR3Q15413 4870 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 ZANQ9Y493 2812 aa2.91□□□□□ -1.94
ITGB1-214ENST00000488427 A0A1B0GTQ1 180 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 GSTTP1A0A1W2PQM5 241 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 K7EQS6 105 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 RTL8CO15255 209 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 YKT6O15498 198 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 PRKAB2O43741 272 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 TNNI3P19429 210 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 MDKP21741 143 aaPredicted RBP2.9□□□□□ -1.95
ITGB1-214ENST00000488427 QARSP47897 775 aaKnown RBP2.9□□□□□ -1.95
ITGB1-214ENST00000488427 GNB2P62879 340 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 CHRNB3Q05901 458 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 RGS1Q08116 209 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 PDGFRLQ15198 375 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 MPPED2Q15777 294 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 IL17AQ16552 155 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 CCDC184Q52MB2 194 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 ZNF311Q5JNZ3 666 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 RAET1GQ6H3X3 334 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 SLC39A4Q6P5W5 647 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 C1orf186Q6ZWK4 172 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 ARCQ7LC44 396 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 ANKRD37Q7Z713 158 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 SKA3Q8IX90 412 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 ELMOD2Q8IZ81 293 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 MTURNQ8N3F0 131 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 METTL13Q8N6R0 699 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 MINDY2Q8NBR6 621 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 OR5AU1Q8NGC0 362 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 HPDLQ96IR7 371 aa2.9□□□□□ -1.95
ITGB1-214ENST00000488427 SLC35E1Q96K37 410 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms