RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 OPN1SWP03999 348 aa21.29■■□□□ 1
LIME1-206ENST00000487026 IGHV4-31P0DP07 118 aa21.29■■□□□ 1
LIME1-206ENST00000487026 THBS4P35443 961 aa21.29■■□□□ 1
LIME1-206ENST00000487026 PDLIM4P50479 330 aa21.29■■□□□ 1
LIME1-206ENST00000487026 POU3F1Q03052 451 aaPredicted RBP21.29■■□□□ 1
LIME1-206ENST00000487026 PMS2P3Q13401 168 aa21.29■■□□□ 1
LIME1-206ENST00000487026 GGTLC2Q14390 218 aa21.29■■□□□ 1
LIME1-206ENST00000487026 DUSP7Q16829 419 aa21.29■■□□□ 1
LIME1-206ENST00000487026 CYB5R2Q6BCY4 276 aa21.29■■□□□ 1
LIME1-206ENST00000487026 DHDDSQ86SQ9 333 aa21.29■■□□□ 1
LIME1-206ENST00000487026 RETREG3Q86VR2 466 aa21.29■■□□□ 1
LIME1-206ENST00000487026 C20orf196Q8IYI0 205 aa21.29■■□□□ 1
LIME1-206ENST00000487026 BHLHE22Q8NFJ8 381 aaPredicted RBP21.29■■□□□ 1
LIME1-206ENST00000487026 OR4F15Q8NGB8 312 aa21.29■■□□□ 1
LIME1-206ENST00000487026 EPYCQ99645 322 aa21.29■■□□□ 1
LIME1-206ENST00000487026 ASPNQ9BXN1 380 aa21.29■■□□□ 1
LIME1-206ENST00000487026 RABEP2Q9H5N1 569 aa21.29■■□□□ 1
LIME1-206ENST00000487026 LEF1Q9UJU2 399 aaPredicted RBP21.29■■□□□ 1
LIME1-206ENST00000487026 FKBP7Q9Y680 259 aa21.29■■□□□ 1
LIME1-206ENST00000487026 SLC35F4A4IF30 521 aa21.28■■□□□ 1
LIME1-206ENST00000487026 M0QX08 132 aa21.28■■□□□ 1
LIME1-206ENST00000487026 AKAP8O43823 692 aaKnown RBP21.28■■□□□ 1
LIME1-206ENST00000487026 SERPINI2O75830 405 aa21.28■■□□□ 1
LIME1-206ENST00000487026 MTPNP58546 118 aa21.28■■□□□ 1
LIME1-206ENST00000487026 LSM11P83369 360 aaKnown RBP eCLIP21.28■■□□□ 1
LIME1-206ENST00000487026 MFSD13AQ14CX5 517 aa21.28■■□□□ 1
LIME1-206ENST00000487026 CYP51A1Q16850 503 aa21.28■■□□□ 1
LIME1-206ENST00000487026 NHLRC1Q6VVB1 395 aa21.28■■□□□ 1
LIME1-206ENST00000487026 RANBP3LQ86VV4 465 aaPredicted RBP21.28■■□□□ 1
LIME1-206ENST00000487026 OR6S1Q8NH40 331 aa21.28■■□□□ 1
LIME1-206ENST00000487026 CKAP2Q8WWK9 683 aa21.28■■□□□ 1
LIME1-206ENST00000487026 FOXN4Q96NZ1 517 aa21.28■■□□□ 1
LIME1-206ENST00000487026 CGREF1Q99674 301 aa21.28■■□□□ 1
LIME1-206ENST00000487026 MCHR1Q99705 422 aa21.28■■□□□ 1
LIME1-206ENST00000487026 NDUFAF1Q9Y375 327 aa21.28■■□□□ 1
LIME1-206ENST00000487026 CORINQ9Y5Q5 1042 aa21.28■■□□□ 1
LIME1-206ENST00000487026 IGHV2OR16-5A0A0B4J2B6 119 aa21.27■■□□□ 1
LIME1-206ENST00000487026 ZNF99A8MXY4 864 aaPredicted RBP21.27■■□□□ 1
LIME1-206ENST00000487026 VWC2LB2RUY7 222 aa21.27■■□□□ 1
LIME1-206ENST00000487026 ZNF16P17020 682 aaPredicted RBP21.27■■□□□ 1
LIME1-206ENST00000487026 ARR3P36575 388 aa21.27■■□□□ 1
LIME1-206ENST00000487026 PCBP3P57721 371 aaKnown RBP21.27■■□□□ 1
LIME1-206ENST00000487026 CAMK2DQ13557 499 aa21.27■■□□□ 1
LIME1-206ENST00000487026 EFNB3Q15768 340 aa21.27■■□□□ 1
LIME1-206ENST00000487026 PODNL1Q6PEZ8 512 aa21.27■■□□□ 1
LIME1-206ENST00000487026 C11orf65Q8NCR3 313 aa21.27■■□□□ 1
LIME1-206ENST00000487026 ANKRD27Q96NW4 1050 aa21.27■■□□□ 1
LIME1-206ENST00000487026 PLK3Q9H4B4 646 aa21.27■■□□□ 1
LIME1-206ENST00000487026 MOV10Q9HCE1 1003 aaKnown RBP21.27■■□□□ 1
LIME1-206ENST00000487026 MRPL39Q9NYK5 338 aaKnown RBP21.27■■□□□ 1
LIME1-206ENST00000487026 SVEP1Q4LDE5 3571 aa21.27■□□□□ 0.99
LIME1-206ENST00000487026 PLPP3O14495 311 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 PDE5AO76074 875 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 IFNA2P01563 188 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 HLA-HP01893 362 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 AHCYP23526 432 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 NR4A2P43354 598 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 PUDPQ08623 228 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 NPTX1Q15818 432 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 RBM45Q8IUH3 476 aaKnown RBP21.26■□□□□ 0.99
LIME1-206ENST00000487026 ZCCHC24Q8N2G6 241 aaKnown RBP21.26■□□□□ 0.99
LIME1-206ENST00000487026 DPP10Q8N608 796 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 SCAIQ8N9R8 606 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 NUP37Q8NFH4 326 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 GPR32P1Q8NGA4 272 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 OR6T1Q8NGN1 323 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 SPATA3Q8NHX4 192 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 MAGEB18Q96M61 343 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 ARHGDIGQ99819 225 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 PIMREGQ9BSJ6 248 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 TMEM43Q9BTV4 400 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 ZNF385DQ9H6B1 395 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 NOX3Q9HBY0 568 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 B3GNT2Q9NY97 397 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 NOX1Q9Y5S8 564 aa21.26■□□□□ 0.99
LIME1-206ENST00000487026 CPSF4LA6NMK7 179 aaKnown RBP21.25■□□□□ 0.99
LIME1-206ENST00000487026 ZNF726A6NNF4 738 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 C11orf98E9PRG8 122 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 hCG_2039718K7EN88 272 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 ANGPT2O15123 496 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 CD79AP11912 226 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 NPR2P20594 1047 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 PIGFQ07326 219 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 LINC00114Q6XXX2 140 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 SPATA21Q7Z572 469 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 SVOPLQ8N434 492 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 ARIH2OSQ8N7S6 290 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 OR4D11Q8NGI4 311 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 VANGL1Q8TAA9 524 aaPredicted RBP21.25■□□□□ 0.99
LIME1-206ENST00000487026 MS4A3Q96HJ5 214 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 NPHS2Q9NP85 383 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 USP22Q9UPT9 525 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 POFUT2Q9Y2G5 429 aa21.25■□□□□ 0.99
LIME1-206ENST00000487026 TMEM129A0AVI4 362 aa21.24■□□□□ 0.99
LIME1-206ENST00000487026 SH3PXD2BA1X283 911 aa21.24■□□□□ 0.99
LIME1-206ENST00000487026 THY1P04216 161 aa21.24■□□□□ 0.99
LIME1-206ENST00000487026 RBBP4Q09028 425 aa21.24■□□□□ 0.99
LIME1-206ENST00000487026 ENTPD8Q5MY95 495 aa21.24■□□□□ 0.99
LIME1-206ENST00000487026 SWT1Q5T5J6 900 aaKnown RBP21.24■□□□□ 0.99
LIME1-206ENST00000487026 KRT80Q6KB66 452 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms