RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ADGRF3Q8IZF5 1079 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 SCGB3A2Q96PL1 93 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 NMNAT3Q96T66 252 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 MRI1Q9BV20 369 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 DCDC2BA2VCK2 349 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 OR2W5A6NFC9 320 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 F8W036 122 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 GOSR2O14653 212 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 GLB1P16278 677 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 MPLP40238 635 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 CAPZBP47756 277 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 MTNR1BP49286 362 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 BLOC1S1P78537 153 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 OCLNQ16625 522 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 COL13A1Q5TAT6 717 aaPredicted RBP10.15□□□□□ -0.79
HDAC6-228ENST00000486227 ABHD12BQ7Z5M8 362 aaPredicted RBP10.15□□□□□ -0.79
HDAC6-228ENST00000486227 C1orf210Q8IVY1 113 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 ZADH2Q8N4Q0 377 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 AMER3Q8N944 861 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 OR52I1Q8NGK6 324 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 ARL5BQ96KC2 179 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 NUDT22Q9BRQ3 303 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM43Q9BTV4 400 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 MTCH2Q9Y6C9 303 aa10.15□□□□□ -0.79
HDAC6-228ENST00000486227 PPP3CBP16298 524 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 PTPN6P29350 595 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CLDN20P56880 219 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CADM4Q8NFZ8 388 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 SP7Q8TDD2 431 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 BRIX1Q8TDN6 353 aaKnown RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 OPALINQ96PE5 141 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 MYEF2Q9P2K5 600 aaKnown RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CAMK2AQ9UQM7 478 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 SPTA1P02549 2419 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 C1orf196B1AJZ1 125 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 KDM4EB2RXH2 506 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 FZD7O75084 574 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ALOX12BO75342 701 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 NSA2O95478 260 aaKnown RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 IRF2P14316 349 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 EEF1A1P68104 462 aaKnown RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 RAB11BQ15907 218 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 HLA-BQ31612 363 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ARHGAP11BQ3KRB8 267 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 OR6V1Q8N148 313 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CA13Q8N1Q1 262 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 GTPBP8Q8N3Z3 284 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM185AQ8NFB2 350 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 PFN4Q8NHR9 129 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ANKRD19PQ9H560 264 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CASP8AP2Q9UKL3 1982 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF705EA8MWA4 302 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 LMO7DNF2Z398 122 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 SYT7O43581 403 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 SUSD5O60279 629 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 UBL3O95164 117 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 OR8G3PP0DMU2 310 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 NPR2P20594 1047 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 NFYAP23511 347 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 STK11Q15831 433 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 VASNQ6EMK4 673 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ACSM5Q6NUN0 579 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF793Q6ZN11 406 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 KCTD9Q7L273 389 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 MARCH3Q86UD3 253 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ARL11Q969Q4 196 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 COX14Q96I36 57 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 IP6K3Q96PC2 410 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF350Q9GZX5 532 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CHST8Q9H2A9 424 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 NOX3Q9HBY0 568 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 PRDM7Q9NQW5 492 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 SLC6A5Q9Y345 797 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 A0A0A6YYD5 115 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 G3V3Y1 287 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 CHP2O43745 196 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 TPPPO94811 219 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 MYF5P13349 255 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 PSMB1P20618 241 aaKnown RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 FXYD6P3P58550 94 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF584Q8IVC4 421 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 SERPINA12Q8IW75 414 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 POGLUT1Q8NBL1 392 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 TCEAL3Q969E4 200 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 FAM71F1Q96KD3 344 aaPredicted RBP10.14□□□□□ -0.79
HDAC6-228ENST00000486227 BCL2L10Q9HD36 194 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 INPP5EQ9NRR6 644 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 ZNF226Q9NYT6 803 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 APC2O95996 2303 aa10.14□□□□□ -0.79
HDAC6-228ENST00000486227 TRAV18A0A075B6X5 111 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM129A0AVI4 362 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 TMEM72A0PK05 275 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 POM121CA8CG34 1229 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 KLRC4-KLRK1H3BQV0 150 aa10.13□□□□□ -0.79
HDAC6-228ENST00000486227 IFITM3Q01628 133 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms