RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 COX6A1P12074 109 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 LAP3P28838 519 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 AQP2P41181 271 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 MMP15P51511 669 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 MYBPC1Q00872 1141 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 AGKQ53H12 422 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CYB5R2Q6BCY4 276 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 RFPL4BQ6ZWI9 263 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 DOK3Q7L591 496 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TBC1D26Q86UD7 250 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SLC22A16Q86VW1 577 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CROCCP3Q8IVE0 287 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 C10orf67Q8IYJ2 551 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 FGFRL1Q8N441 504 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 HORMAD2Q8N7B1 307 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 LRRC75AQ8NAA5 344 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 NUP43Q8NFH3 380 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 OR9G4Q8NGQ1 327 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PHF10Q8WUB8 498 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PSMF1Q92530 271 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 NAPGQ99747 312 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PSD2Q9BQI7 771 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 LMF2Q9BU23 707 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 BDH2Q9BUT1 245 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 NUDT9Q9BW91 350 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SLC29A3Q9BZD2 475 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 C1orf198Q9H425 327 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 POLE4Q9NR33 117 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ABCB10Q9NRK6 738 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 STMN3Q9NZ72 180 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PTTG2Q9NZH5 202 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 FBXO5Q9UKT4 447 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ERGIC3Q9Y282 383 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 WIF1Q9Y5W5 379 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 HS3ST3B1Q9Y662 390 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 NCOA6Q14686 2063 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 OR51F1A6NGY5 319 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 LCMT2O60294 686 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TRIM13O60858 407 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 OR2J3O76001 311 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SERPINE2P07093 398 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TMEM225BP0DP42 221 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PSMB5P28074 263 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 IMPA1P29218 277 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CRABP2P29373 138 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 FEN1P39748 380 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TDGF1P3P51864 188 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SPCS3P61009 180 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 HERVK_113P63132 956 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ERVK-25P63136 954 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 IGLV3-21P80748 117 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 NFYCQ13952 458 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CCNIQ14094 377 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 GK3PQ14409 553 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ACSBG2Q5FVE4 666 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ANKRD22Q5VYY1 191 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 NIPAL3Q6P499 406 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 FOXR1Q6PIV2 292 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 KIRREL2Q6UWL6 708 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 IL17RELQ6ZVW7 336 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 OR1L6Q8NGR2 347 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 MAGOHBQ96A72 148 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 WDYHV1Q96HA8 205 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ERVK-6Q9BXR3 956 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SAP30LQ9HAJ7 183 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CHMP1AQ9HD42 196 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 GPR83Q9NYM4 423 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TAS2R13Q9NYV9 303 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 P2RX2Q9UBL9 471 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF282Q9UDV7 671 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 MMACHCQ9Y4U1 282 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 OARD1Q9Y530 152 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 HCRTR1O43613 425 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 DEAF1O75398 565 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 RAD51DO75771 328 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 VAPBO95292 243 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ZGLP1P0C6A0 271 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ZSCAN5DPP0CG00 497 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ELAVL4P26378 380 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 MAGEA12P43365 314 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PSMD4P55036 377 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SIRPAP78324 504 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SORDQ00796 357 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TSPAN31Q12999 210 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TCHHL1Q5QJ38 904 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CAPN13Q6MZZ7 669 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TMEM107Q6UX40 140 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 PLXDC2Q6UX71 529 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SLC16A9Q7RTY1 509 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 DND1Q8IYX4 353 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 GABRG1Q8N1C3 465 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 OR11G2Q8NGC1 345 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 TP53INP1Q96A56 240 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 FYTTD1Q96QD9 318 aaKnown RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 KLHDC3Q9BQ90 382 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 SYT3Q9BQG1 590 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 LPAR2Q9HBW0 351 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 STOX2Q9P2F5 926 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-205ENST00000485055 B3GNT3Q9Y2A9 372 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 MEMO1Q9Y316 297 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms