RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 MARCH7Q9H992 704 aa11.95□□□□□ -0.5
CPNE1-225ENST00000483495 FAIMQ9NVQ4 179 aa11.95□□□□□ -0.5
CPNE1-225ENST00000483495 TBCCD1Q9NVR7 557 aa11.95□□□□□ -0.5
CPNE1-225ENST00000483495 PADI1Q9ULC6 663 aa11.95□□□□□ -0.5
CPNE1-225ENST00000483495 R4GN57 208 aa11.95□□□□□ -0.5
CPNE1-225ENST00000483495 PCNX3Q9H6A9 2034 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 C11orf98E9PRG8 122 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 CASKO14936 926 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 TRIM3O75382 744 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-225ENST00000483495 RAB40ALP0C0E4 278 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 MTNR1BP49286 362 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 ZNF41P51814 821 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-225ENST00000483495 GBX2P52951 348 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-225ENST00000483495 SIRPAP78324 504 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 CDK5R1Q15078 307 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 ACKR1Q16570 336 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 TP53I3Q53FA7 332 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 OPN5Q6U736 354 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 LYPD4Q6UWN0 246 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 RPTNQ6XPR3 784 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 RAB11FIP2Q7L804 512 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 PXKQ7Z7A4 578 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 FADS6Q8N9I5 356 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 OR2M3Q8NG83 312 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 ABHD4Q8TB40 342 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 POC1BQ8TC44 478 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 RPS4Y2Q8TD47 263 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 DDIT4LQ96D03 193 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 SMIM19Q96E16 107 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 CEP19Q96LK0 163 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 MNTQ99583 582 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 VSX1Q9NZR4 365 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-225ENST00000483495 VDAC3Q9Y277 283 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 CMAHPQ9Y471 501 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
CPNE1-225ENST00000483495 NSG1A0A0A6YYJ2 146 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 PRSS37A4D1T9 235 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 ANKRD33BA6NCL7 494 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 NPIPB13A6NJU9 1138 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 FAM171A2A8MVW0 826 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 NPIPB4C9JG80 1138 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 H7C1C5 153 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 MAGEB3O15480 346 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 ARHGEF9O43307 516 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 OR6A2O95222 327 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 ZNF806P0C7X5 589 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 CFL1P23528 166 aaKnown RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 LCN6P62502 163 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 SLC3A1Q07837 685 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 ATP1A4Q13733 1029 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 RPL22L1Q6P5R6 122 aaKnown RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 C6orf15Q6UXA7 325 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 CDC20BQ86Y33 519 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 LYSMD2Q8IV50 215 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 DND1Q8IYX4 353 aaKnown RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 TEX19Q8NA77 164 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 DNAJA3Q96EY1 480 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 ARL5BQ96KC2 179 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 SYT4Q9H2B2 425 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 SRA1Q9HD15 236 aaKnown RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 SH2D2AQ9NP31 389 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 FANCFQ9NPI8 374 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 hCG_2014768A0A024R1R8 64 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 XKRYO14609 159 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 DVL2O14641 736 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 RGS5O15539 181 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 EFNA2O43921 213 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 OCM2P0CE71 109 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 OCMP0CE72 109 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 TGM1P22735 817 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 AHCYP23526 432 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 ACVR1BP36896 505 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 SF3A2Q15428 464 aaKnown RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 H1FNTQ75WM6 255 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 TIPARPQ7Z3E1 657 aaKnown RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 PPP1R32Q7Z5V6 425 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 KCTD20Q7Z5Y7 419 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 LAX1Q8IWV1 398 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 PM20D2Q8IYS1 436 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 WDSUB1Q8N9V3 476 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 GHSRQ92847 366 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 SDHCQ99643 169 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-225ENST00000483495 CCDC32Q9BV29 185 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 MIXL1Q9H2W2 232 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 DAPK2Q9UIK4 370 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 GNG8Q9UK08 70 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 TCFL5Q9UL49 500 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 V9GYH0 126 aa11.93□□□□□ -0.5
CPNE1-225ENST00000483495 LIPT2A6NK58 231 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 MS4A18H0YCH9 400 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 MAGEB4O15481 346 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-225ENST00000483495 TBX1O43435 398 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 IMPDH2P12268 514 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 IL11P20809 199 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 ADH6P28332 368 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 CENPAP49450 140 aa11.92□□□□□ -0.5
CPNE1-225ENST00000483495 MLF1P58340 268 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms