RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TMEM255BQ8WV15 326 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 MARC2Q969Z3 335 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 BBC3Q96PG8 261 aaPredicted RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 BARD1Q99728 777 aaKnown RBP10.43□□□□□ -0.74
HPS4-212ENST00000481910 PRSS27Q9BQR3 290 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 MROQ9BYG7 248 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 REEP1Q9H902 201 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 MAN2C1Q9NTJ4 1040 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 AP4B1Q9Y6B7 739 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 U3KQV3 271 aa10.43□□□□□ -0.74
HPS4-212ENST00000481910 A0A1B0GVC2 190 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 A8MVM7 634 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 H3BNX3 289 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 ZNF208O43345 1280 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 DEAF1O75398 565 aaPredicted RBP10.42□□□□□ -0.74
HPS4-212ENST00000481910 FCGR1AP12314 374 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 FASP25445 335 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 FKBP2P26885 142 aaKnown RBP10.42□□□□□ -0.74
HPS4-212ENST00000481910 SFTPDP35247 375 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 NR1H2P55055 460 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 OXA1LQ15070 435 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 TRIM16LQ309B1 348 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 NHSL2Q5HYW2 709 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 RRM2BQ7LG56 351 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 UBQLNLQ8IYU4 475 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 SLC7A13Q8TCU3 470 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 SLC25A43Q8WUT9 341 aaPredicted RBP10.42□□□□□ -0.74
HPS4-212ENST00000481910 LRTOMTQ8WZ04 291 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 ZDHHC16Q969W1 377 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 TMIGD2Q96BF3 282 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 DDIT4LQ96D03 193 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 TIMP4Q99727 224 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 OR11A1Q9GZK7 315 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 ANKRD19PQ9H560 264 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 DDX28Q9NUL7 540 aaKnown RBP10.42□□□□□ -0.74
HPS4-212ENST00000481910 SPRR3Q9UBC9 169 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 DNAJB9Q9UBS3 223 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 SAMHD1Q9Y3Z3 626 aaKnown RBP10.42□□□□□ -0.74
HPS4-212ENST00000481910 GTF3C1Q12789 2109 aa10.42□□□□□ -0.74
HPS4-212ENST00000481910 ZC3H12DA2A288 527 aaKnown RBP10.41□□□□□ -0.74
HPS4-212ENST00000481910 GJE1A6NN92 205 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 NPIPA2E9PIF3 369 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 NPIPA3F8WFD2 350 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 WRBO00258 174 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 TNFRSF11BO00300 401 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 AQP7O14520 342 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 ZNHIT1O43257 154 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 SEC14L5O43304 696 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 LDLRP01130 860 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 RAB4AP20338 218 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 ENTPD1P49961 510 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 TDGF1P3P51864 188 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 CHN2P52757 468 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 SRYQ05066 204 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 EGR4Q05215 589 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 CRYZQ08257 329 aaKnown RBP10.41□□□□□ -0.74
HPS4-212ENST00000481910 PPP1R8Q12972 351 aaKnown RBP10.41□□□□□ -0.74
HPS4-212ENST00000481910 SAPCD1Q5SSQ6 148 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 DCST1Q5T197 706 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 AMIGO2Q86SJ2 522 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 TMEM239Q8WW34 195 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 AKAP1Q92667 903 aaKnown RBP eCLIP10.41□□□□□ -0.74
HPS4-212ENST00000481910 SARAFQ96BY9 339 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 DNAJA3Q96EY1 480 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 BDH2Q9BUT1 245 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 NARFLQ9H6Q4 476 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 LYVE1Q9Y5Y7 322 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 A0A087WUU8 490 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 TRBV4-1A0A0J9YWV2 114 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 EIF1AYO14602 144 aaKnown RBP10.41□□□□□ -0.74
HPS4-212ENST00000481910 CLUP10909 449 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 SHC1P29353 583 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 RBM34P42696 430 aaKnown RBP10.41□□□□□ -0.74
HPS4-212ENST00000481910 LHX2P50458 406 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 HMGA2P52926 109 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 SUCLG1P53597 346 aaKnown RBP10.41□□□□□ -0.74
HPS4-212ENST00000481910 CLDN20P56880 219 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 ATP6AP1Q15904 470 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 C21orf62-AS1Q17RA5 79 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 C1QL3Q5VWW1 255 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 PODNL1Q6PEZ8 512 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 TBPL2Q6SJ96 375 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 ZNF730Q6ZMV8 503 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 SPATC1Q76KD6 591 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 OR56B2PQ8NGI1 322 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 STK35Q8TDR2 534 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 KLHL15Q96M94 604 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 OR5B2Q96R09 309 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 TMEM43Q9BTV4 400 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 SEMA6AQ9H2E6 1030 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 VNN3Q9NY84 501 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 MED31Q9Y3C7 131 aa10.41□□□□□ -0.74
HPS4-212ENST00000481910 ZGRF1Q86YA3 2104 aa10.4□□□□□ -0.74
HPS4-212ENST00000481910 COL6A6A6NMZ7 2263 aa10.4□□□□□ -0.74
HPS4-212ENST00000481910 IGKV1D-42A0A075B6H8 117 aa10.4□□□□□ -0.74
HPS4-212ENST00000481910 A0A1W2PNR3 127 aa10.4□□□□□ -0.74
HPS4-212ENST00000481910 OR14I1A6ND48 311 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms