RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CDH12P55289 794 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 NAAAQ02083 359 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 CCDC80Q76M96 950 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 ZNF627Q7L945 461 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 PTOV1Q86YD1 416 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 TMEM123Q8N131 208 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 CIARTQ8N365 385 aaPredicted RBP9.99□□□□□ -0.81
CCM2-213ENST00000480658 SMYD1Q8NB12 490 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 OR10A6Q8NH74 314 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 ADAMTS16Q8TE57 1224 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 LZICQ8WZA0 190 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 FAM168AQ92567 244 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 BCL2L2Q92843 193 aaPredicted RBP9.99□□□□□ -0.81
CCM2-213ENST00000480658 TMEM120AQ9BXJ8 343 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 C1orf198Q9H425 327 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 GPR35Q9HC97 309 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 NSD1Q96L73 2696 aaPredicted RBP9.99□□□□□ -0.81
CCM2-213ENST00000480658 IGKV1D-42A0A075B6H8 117 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 IGHV1-18A0A0C4DH31 117 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 CD5LO43866 347 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 TPST1O60507 370 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 UPK3AO75631 287 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 FARS2O95363 451 aaKnown RBP9.98□□□□□ -0.81
CCM2-213ENST00000480658 RAB36O95755 333 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 F12P00748 615 aaPredicted RBP9.98□□□□□ -0.81
CCM2-213ENST00000480658 IFNA2P01563 188 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 ADORA3P0DMS8 318 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 AHCYP23526 432 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 CAPZA2P47755 286 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 LOXL1Q08397 574 aaPredicted RBP9.98□□□□□ -0.81
CCM2-213ENST00000480658 SPOCK1Q08629 439 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 GSG1Q2KHT4 349 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 CEACAM16Q2WEN9 425 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 ENTPD8Q5MY95 495 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 REP15Q6BDI9 236 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 UGT2A3Q6UWM9 527 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 SLC46A3Q7Z3Q1 461 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 PIWIL3Q7Z3Z3 882 aaKnown RBP9.98□□□□□ -0.81
CCM2-213ENST00000480658 C20orf196Q8IYI0 205 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 OR6N1Q8NGY5 312 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 ULBP2Q9BZM5 246 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 RAB1BQ9H0U4 201 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 MOKQ9UQ07 419 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 POFUT2Q9Y2G5 429 aa9.98□□□□□ -0.81
CCM2-213ENST00000480658 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.811e-6■■■■■ 35.4
CCM2-213ENST00000480658 A0A096LPE4 126 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 A0A1W2PPZ6 126 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 SLC22A23A1A5C7 686 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 M0R3G1 203 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 M0R3H8 397 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 PLPP3O14495 311 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 RNF13O43567 381 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 PTHP01270 115 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 BGLAPP02818 100 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 CECR9P0C854 216 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 CSNK1A1P48729 337 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 EVX1P49640 407 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 PDLIM4P50479 330 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 DAP3P51398 398 aaKnown RBP9.97□□□□□ -0.81
CCM2-213ENST00000480658 FOXG1P55316 489 aaPredicted RBP9.97□□□□□ -0.81
CCM2-213ENST00000480658 ARF1P84077 181 aaKnown RBP9.97□□□□□ -0.81
CCM2-213ENST00000480658 SLC25A3Q00325 362 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 GALK2Q01415 458 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 ZP4Q12836 540 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 ZNF74Q16587 644 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 DUSP7Q16829 419 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 SWI5Q1ZZU3 235 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 NANOGP8Q6NSW7 305 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 UNQ6126/PRO20091Q6UXV3 157 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 Q71RC1 249 aaPredicted RBP9.97□□□□□ -0.81
CCM2-213ENST00000480658 NANOGNBQ7Z5D8 188 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 C10orf111Q8N326 155 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 OR10H5Q8NGA6 315 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 OR6T1Q8NGN1 323 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 OR6X1Q8NH79 312 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 FNDC8Q8TC99 324 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 ZNF566Q969W8 418 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 LRRC58Q96CX6 371 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 SLC25A44Q96H78 314 aaPredicted RBP9.97□□□□□ -0.81
CCM2-213ENST00000480658 ZNF426Q9BUY5 554 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 C1QTNF6Q9BXI9 259 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 NDEL1Q9GZM8 345 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 CCDC134Q9H6E4 229 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 NANOGQ9H9S0 305 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 TMEM160Q9NX00 188 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 LPAR3Q9UBY5 353 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 CAPN7Q9Y6W3 813 aa9.97□□□□□ -0.81
CCM2-213ENST00000480658 ABCA2Q9BZC7 2435 aa9.96□□□□□ -0.81
CCM2-213ENST00000480658 LOC390937A0A1W2PQ73 354 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 A0A1W2PRG6 482 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 NPIPB13A6NJU9 1138 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 CPSF4LA6NMK7 179 aaKnown RBP9.96□□□□□ -0.82
CCM2-213ENST00000480658 NPIPB4C9JG80 1138 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 MS4A18H0YCH9 400 aa9.96□□□□□ -0.82
CCM2-213ENST00000480658 MRASO14807 208 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms