RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GORASP2Q9H8Y8 452 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SEC61A2Q9H9S3 476 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM27Q9HBJ8 222 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 SPAG4Q9NPE6 437 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 CTPS2Q9NRF8 586 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TAS2R16Q9NYV7 291 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 STX18Q9P2W9 335 aaKnown RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ST6GALNAC2Q9UJ37 374 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ARL2BPQ9Y2Y0 163 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 TMED7Q9Y3B3 224 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 ICE1Q9Y2F5 2266 aa4.33□□□□□ -1.72
PTCD3-213ENST00000480102 LRBAP50851 2863 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SVILO95425 2214 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TRAV36DV7A0A075B6V5 113 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NPIPA5A0A0B4J1W7 369 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ELOVL7A1L3X0 281 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TRAPPC13A5PLN9 417 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NKX2-6A6NCS4 301 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CLDN24A6NM45 220 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 DEFB108AA8MXU0 73 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 EEF1E1-BLOC1S5C9J1V9 151 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 C9JVG2 144 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NPIPA7E9PJI5 369 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 M0QX08 132 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MRASO14807 208 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 AIM2O14862 343 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CASKO14936 926 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 EEF1E1O43324 174 aaKnown RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 FRS3O43559 492 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 AHCYL1O43865 530 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MRPL33O75394 65 aaKnown RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF432O94892 652 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 AHSA1O95433 338 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 FESP07332 822 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NPIPA8P0DM63 369 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NR2C1P13056 603 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 COX4I1P13073 169 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 HSD17B1P14061 328 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PRF1P14222 555 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 POU2F1P14859 743 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CD1EP15812 388 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF20P17024 532 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 FPR1P21462 350 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 DRD4P21917 467 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 HTR2AP28223 471 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SHC1P29353 583 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MPGP29372 298 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CCKARP32238 428 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 IFNA8P32881 189 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 KDELR2P33947 212 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CPA2P48052 419 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CCR4P51679 360 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF133P52736 654 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CRYBA2P53672 197 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NCALDP61601 193 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SELENOWP63302 87 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 EGR4Q05215 589 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 DMTNQ08495 405 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZP4Q12836 540 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PIN1Q13526 163 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ICAM4Q14773 271 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TAF11Q15544 211 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NPTX1Q15818 432 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ETFDHQ16134 617 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 DUSP7Q16829 419 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MMEL1Q495T6 779 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZMAT1Q5H9K5 638 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ALG10BQ5I7T1 473 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CRYBG3Q68DQ2 2970 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM200BQ69YZ2 307 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 REP15Q6BDI9 236 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 VWA1Q6PCB0 445 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NHLRC1Q6VVB1 395 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NCCRP1Q6ZVX7 275 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 H1FNTQ75WM6 255 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 HDDC2Q7Z4H3 204 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PXKQ7Z7A4 578 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SNX32Q86XE0 403 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 VRK2Q86Y07 508 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TUSC5Q8IXB3 177 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SLC15A3Q8IY34 581 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 GCNT2Q8N0V5 402 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 C10orf111Q8N326 155 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TMCO5AQ8N6Q1 288 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZIC4Q8N9L1 334 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 GATSQ8NAP1 163 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 OR2T12Q8NG77 320 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 OR10A6Q8NH74 314 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 FNDC8Q8TC99 324 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PNPT1Q8TCS8 783 aaKnown RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ABHD3Q8WU67 409 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 LZICQ8WZA0 190 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PIGTQ969N2 578 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 OTUB1Q96FW1 271 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ARL5BQ96KC2 179 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 C16orf92Q96LL3 132 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ADAD1Q96M93 576 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms