RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PNMTP11086 282 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 ANPEPP15144 967 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 RPS5P46782 204 aaKnown RBP12.53□□□□□ -0.4
ATG4B-218ENST00000479554 MTPNP58546 118 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 SELPLGQ14242 412 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 FXNQ16595 210 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 LCN8Q6JVE9 175 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 REEP3Q6NUK4 255 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 CLEC2AQ6UVW9 174 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 EPHX4Q8IUS5 362 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 PYDC1Q8WXC3 89 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 RSRC1Q96IZ7 334 aaKnown RBP12.53□□□□□ -0.4
ATG4B-218ENST00000479554 CPPED1Q9BRF8 314 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-218ENST00000479554 RHNO1Q9BSD3 238 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 C12orf10Q9HB07 376 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 CORO2BQ9UQ03 480 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 SNX13Q9Y5W8 968 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 PLCE1Q9P212 2302 aa12.53□□□□□ -0.4
ATG4B-218ENST00000479554 CR1P17927 2039 aa12.52□□□□□ -0.4
ATG4B-218ENST00000479554 A0A1B0GWA3 101 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 AQP12BA6NM10 295 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 ATP6V1G2-DDX39BF2Z307 99 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 BAG2O95816 211 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 LGI1O95970 557 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 BMP4P12644 408 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 ZNF43P17038 809 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 ERFP50548 548 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 DSCR9P59020 149 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
ATG4B-218ENST00000479554 CDK6Q00534 326 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 EGR4Q05215 589 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 RAB35Q15286 201 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 HMBOX1Q6NT76 420 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 DHRS4L2Q6PKH6 230 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 C5orf46Q6UWT4 87 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 AQP12AQ8IXF9 295 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 C10orf111Q8N326 155 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 SLC38A4Q969I6 547 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-218ENST00000479554 DUS3LQ96G46 650 aaKnown RBP12.52□□□□□ -0.41
ATG4B-218ENST00000479554 BOD1Q96IK1 185 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 LINC00470Q9BZP3 86 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
ATG4B-218ENST00000479554 MOKQ9UQ07 419 aa12.52□□□□□ -0.41
ATG4B-218ENST00000479554 IGHV4-30-2A0A087WSY4 118 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 TCRBV3S1A0A5B6 114 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-218ENST00000479554 H7C417 338 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 ARPC2O15144 300 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 OR2T1O43869 369 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 CRLF1O75462 422 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 GMNNO75496 209 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 UPK3AO75631 287 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 HTR2AP28223 471 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 APOBEC3AP31941 199 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-218ENST00000479554 SH3BGRP55822 239 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-218ENST00000479554 CLDN17P56750 224 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 IL1RL1Q01638 556 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 CHRNB3Q05901 458 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 SCARB2Q14108 478 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 ALG10BQ5I7T1 473 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 FAM69AQ5T7M9 428 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 KDM8Q8N371 416 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 OR2T12Q8NG77 320 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-218ENST00000479554 HTRA1Q92743 480 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 SLC38A2Q96QD8 506 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 ZNF607Q96SK3 696 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 TMEM38AQ9H6F2 299 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 SEC14L4Q9UDX3 406 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 TESQ9UGI8 421 aaKnown RBP12.51□□□□□ -0.41
ATG4B-218ENST00000479554 EGFL7Q9UHF1 273 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 MAGEL2Q9UJ55 1249 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 GMEB1Q9Y692 573 aa12.51□□□□□ -0.41
ATG4B-218ENST00000479554 TRAV36DV7A0A075B6V5 113 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 IGHV1-18A0A0C4DH31 117 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 H3BNX3 289 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 M0R082 166 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 TLX2O43763 284 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-218ENST00000479554 CD5LO43866 347 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 FZD7O75084 574 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 SLC43A1O75387 559 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 ATP6V1B2P21281 511 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 PAX7P23759 505 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 AQP1P29972 269 aa12.5□□□□□ -0.41
ATG4B-218ENST00000479554 VHLP40337 213 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms