RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 OR2M3Q8NG83 312 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 OR5W2Q8NH69 310 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SNX33Q8WV41 574 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 FAR1Q8WVX9 515 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PYDC1Q8WXC3 89 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 NR4A3Q92570 626 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 TFAP2CQ92754 450 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PROX1Q92786 737 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 POP5Q969H6 163 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 RAB24Q969Q5 203 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SNRNP40Q96DI7 357 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 TMEM80Q96HE8 168 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 CNBD2Q96M20 576 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GNRHR2Q96P88 292 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SPATA25Q9BR10 227 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PIGQQ9BRB3 760 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 C6orf62Q9GZU0 229 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF703Q9H7S9 590 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PROK2Q9HC23 129 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 B3GNT2Q9NY97 397 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 TAS2R10Q9NYW0 307 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 MED11Q9P086 117 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 EMC3Q9P0I2 261 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 RPS6KB2Q9UBS0 482 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 GLS2Q9UI32 602 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF221Q9UK13 617 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 POU2F3Q9UKI9 436 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 NPIPA1Q9UND3 350 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SAMD4AQ9UPU9 718 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SLC9A8Q9Y2E8 581 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 MRPS18CQ9Y3D5 142 aaKnown RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 SPIN1Q9Y657 262 aaPredicted RBP5.58□□□□□ -1.52
SF3B1-209ENST00000479532 NINQ8N4C6 2090 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 PKD1L2Q7Z442 2459 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 USP24Q9UPU5 2620 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 LAMA5O15230 3695 aa5.58□□□□□ -1.52
SF3B1-209ENST00000479532 CDHR4A6H8M9 788 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 PINLYPA6NC86 204 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 LRRC3CA6NJW4 275 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 GJE1A6NN92 205 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SYT5O00445 386 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 AP3D1O14617 1153 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 MFN2O95140 757 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SNAPINO95295 136 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF682O95780 498 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ACTL6AO96019 429 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 HPNP05981 417 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 YES1P07947 543 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 FCGR1AP12314 374 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 GP1BBP13224 206 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ABOP16442 354 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF17P17021 662 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 GGT1P19440 569 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 BTF3P20290 206 aaKnown RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ME2P23368 584 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 KDELR2P33947 212 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 UGT2B10P36537 528 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 HTR3AP46098 478 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 OR3A3P47888 321 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SLC6A9P48067 706 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 MAP2K6P52564 334 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 PPP5CP53041 499 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 MLLT10P55197 1068 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 RGS8P57771 180 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 EEF1A1P68104 462 aaKnown RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF117Q03924 483 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SKP2Q13309 424 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 MAPK11Q15759 364 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 MAPK14Q16539 360 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SOWAHCQ53LP3 525 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 YIF1BQ5BJH7 314 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 MTX3Q5HYI7 312 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 COLEC12Q5KU26 742 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 PDSS1Q5T2R2 415 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 FNDC7Q5VTL7 733 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 AGAP6Q5VW22 663 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 RAET1LQ5VY80 246 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 GLYATQ6IB77 296 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ARHGAP11AQ6P4F7 1023 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ZNF773Q6PK81 442 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 GFRALQ6UXV0 394 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 APOOLQ6UXV4 268 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 CHMP1BQ7LBR1 199 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 OLIG3Q7RTU3 272 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 HMGN2P46Q86SG4 172 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 C10orf111Q8N326 155 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 RNF148Q8N7C7 305 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 WDSUB1Q8N9V3 476 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 FAM156AQ8NDB6 213 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 FAM83FQ8NEG4 500 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SETD6Q8TBK2 473 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 CAPSLQ8WWF8 208 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ST8SIA1Q92185 356 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 SARAFQ96BY9 339 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 INTS12Q96CB8 462 aaKnown RBP5.57□□□□□ -1.52
SF3B1-209ENST00000479532 ARSGQ96EG1 525 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 TPD52L3Q96J77 140 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 NSMCE2Q96MF7 247 aa5.57□□□□□ -1.52
SF3B1-209ENST00000479532 GPR137Q96N19 417 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms