RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TEX29Q8N6K0 151 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 Q8NBF4 154 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 ZNF540Q8NDQ6 660 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 NUP37Q8NFH4 326 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 OR5L2Q8NGL0 311 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 BLOC1S5Q8TDH9 187 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 NAT14Q8WUY8 206 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 ASZ1Q8WWH4 475 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 PANX2Q96RD6 677 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 NAA11Q9BSU3 229 aaPredicted RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 SLITRK2Q9H156 845 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 DNAJC4Q9NNZ3 241 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 MRPS30Q9NP92 439 aaKnown RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 NGBQ9NPG2 151 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 TEX10Q9NXF1 929 aaPredicted RBP3.73□□□□□ -1.81
VPS50-214ENST00000477935 CNIH4Q9P003 139 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 FETUBQ9UGM5 382 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 FAM153AQ9UHL3 310 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 MOB4Q9Y3A3 225 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 SLC22A7Q9Y694 548 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 MALRD1Q5VYJ5 2156 aa3.73□□□□□ -1.81
VPS50-214ENST00000477935 RAI1Q7Z5J4 1906 aaPredicted RBP3.72□□□□□ -1.81
VPS50-214ENST00000477935 HEATR5AQ86XA9 2040 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 A0A0G2JMM0 328 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 A0A1W2PPB8 328 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 A0A1W2PRS3 328 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 KIR3DP1A8MWS1 328 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 G3V3Y1 287 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 SGK494L7N484 410 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 KCNK1O00180 336 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 MFSD11O43934 449 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 SNX3O60493 162 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TRAPPC6AO75865 159 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TNFSF13O75888 250 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 ATP1B1P05026 303 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 HPNP05981 417 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 GATA1P15976 413 aaPredicted RBP3.72□□□□□ -1.81
VPS50-214ENST00000477935 ACHEP22303 614 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 SHC1P29353 583 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 HSD17B2P37059 387 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 SOX3P41225 446 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 DNASE1L1P49184 302 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 PRDX1Q06830 199 aaKnown RBP3.72□□□□□ -1.81
VPS50-214ENST00000477935 RASGEF1BQ0VAM2 473 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 MOGAT2Q3SYC2 334 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TEX44Q53QW1 395 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 AGAP6Q5VW22 663 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 KLHL10Q6JEL2 608 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 HSDL2Q6YN16 418 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 SERPINA9Q86WD7 417 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 SLC22A15Q8IZD6 547 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 MCOLN2Q8IZK6 566 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 CLDN19Q8N6F1 224 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 GPATCH11Q8N954 259 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 CAMKVQ8NCB2 501 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 OR4K2Q8NGD2 314 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 OR8K3Q8NH51 312 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 C10orf105Q8TEF2 133 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TSLPQ969D9 159 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 STARD4Q96DR4 205 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 PGM2Q96G03 612 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 RASL10BQ96S79 203 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 PCDHB18PQ96TA0 734 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 DCTN5Q9BTE1 182 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TSSK1BQ9BXA7 367 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 MED20Q9H944 212 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 MRPL47Q9HD33 250 aaKnown RBP3.72□□□□□ -1.81
VPS50-214ENST00000477935 GSN-AS1Q9NRJ2 163 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TXNDC16Q9P2K2 825 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 RNF115Q9Y4L5 304 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 CCL27Q9Y4X3 112 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 ARHGAP21Q5T5U3 1957 aa3.72□□□□□ -1.81
VPS50-214ENST00000477935 TRBV5-4A0A0C4DH59 114 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 A0A1W2PNV4 684 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 GOLGA6L4A6NEF3 574 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 CCL24O00175 119 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 SCAMP2O15127 329 aaKnown RBP3.71□□□□□ -1.82
VPS50-214ENST00000477935 PIN1P1O15428 100 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 MYO1DO94832 1006 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 CCDC172P0C7W6 258 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 DPP4P27487 766 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 GDF1P27539 372 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 MTIF2P46199 727 aaKnown RBP3.71□□□□□ -1.82
VPS50-214ENST00000477935 OR3A2P47893 321 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 TRPC1P48995 793 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 CDK9P50750 372 aaKnown RBP3.71□□□□□ -1.82
VPS50-214ENST00000477935 CCR8P51685 355 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 RAD23AP54725 363 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 TMEM50BP56557 158 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 UBASH3AP57075 661 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 RPS15AP62244 130 aaKnown RBP3.71□□□□□ -1.82
VPS50-214ENST00000477935 HSPA14Q0VDF9 509 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 PIGHQ14442 188 aaPredicted RBP3.71□□□□□ -1.82
VPS50-214ENST00000477935 ITIH4Q14624 930 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 ARHGAP19Q14CB8 494 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 PDK2Q15119 407 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 TAB1Q15750 504 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 CST9LP1Q5W188 147 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 NCBP2-AS2Q69YL0 99 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms