RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ARPINQ7Z6K5 226 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 C20orf196Q8IYI0 205 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 GPR137CQ8N3F9 429 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 POU5F2Q8N7G0 328 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 OR2T12Q8NG77 320 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 GTPBP3Q969Y2 492 aaKnown RBP18.98■□□□□ 0.63
COL9A3-211ENST00000477612 TXNDC15Q96J42 360 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 SMR3AQ99954 134 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 CRLF2Q9HC73 371 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 CBLN4Q9NTU7 201 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 POU2F3Q9UKI9 436 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 SH3GLB1Q9Y371 365 aa18.98■□□□□ 0.63
COL9A3-211ENST00000477612 IGHV1-18A0A0C4DH31 117 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 SLC35F4A4IF30 521 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 TRIM64A6NGJ6 449 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 TRIM64BA6NI03 449 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 H7C1Q1 480 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 IGF2P01344 180 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 IGKV3-15P01624 115 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 IGLV1-44P01699 117 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ASAH2BP0C7U1 165 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 COX4I1P13073 169 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 PTNP21246 168 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 UBE2NP61088 152 aaKnown RBP18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ARF1P84077 181 aaKnown RBP18.97■□□□□ 0.63
COL9A3-211ENST00000477612 CEACAM16Q2WEN9 425 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 PHYHD1Q5SRE7 291 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 C8orf82Q6P1X6 216 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-211ENST00000477612 DNM1P46Q6ZS02 220 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ZNF627Q7L945 461 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 SLC15A3Q8IY34 581 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 MICU2Q8IYU8 434 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ZNF837Q96EG3 531 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-211ENST00000477612 SLC38A2Q96QD8 506 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 MEPEQ9NQ76 525 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-211ENST00000477612 MED29Q9NX70 200 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 CMTM6Q9NX76 183 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 TAS2R5Q9NYW4 299 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ZNF229Q9UJW7 825 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ZANQ9Y493 2812 aa18.97■□□□□ 0.63
COL9A3-211ENST00000477612 ELOVL7A1L3X0 281 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 ZNF99A8MXY4 864 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-211ENST00000477612 OR5F1O95221 314 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 SELENOWP63302 87 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 IL1RL1Q01638 556 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 CYBRD1Q53TN4 286 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 WDFY1Q8IWB7 410 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 CCDC36Q8IYA8 594 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 MUC15Q8N387 334 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 C10orf53Q8N6V4 93 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 HOPXQ9BPY8 73 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-211ENST00000477612 EMC6Q9BV81 110 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 KATNB1Q9BVA0 655 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 NANSQ9NR45 359 aa18.96■□□□□ 0.63
COL9A3-211ENST00000477612 A0A096LPE4 126 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 A0A1W2PPZ6 126 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 CH25HO95992 272 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 ADORA3P0DMS8 318 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 THRBP10828 461 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 TNFRSF1BP20333 461 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 AHCYP23526 432 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 APOBEC3AP31941 199 aaPredicted RBP18.95■□□□□ 0.62
COL9A3-211ENST00000477612 RBM34P42696 430 aaKnown RBP18.95■□□□□ 0.62
COL9A3-211ENST00000477612 FABP6P51161 128 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 HACD2Q6Y1H2 254 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 SLC46A3Q7Z3Q1 461 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 TREML1Q86YW5 311 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 FBXL14Q8N1E6 418 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 EFCAB1Q9HAE3 211 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 CR1P17927 2039 aa18.95■□□□□ 0.62
COL9A3-211ENST00000477612 NSD1Q96L73 2696 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-211ENST00000477612 ZNF726A6NNF4 738 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 IGHV4-39P01824 125 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 MT-ND1P03886 318 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 HEXAP06865 529 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 CBR1P16152 277 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 CLEC12BQ2HXU8 276 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 NKAIN4Q8IVV8 208 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 LRRC17Q8N6Y2 441 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 OR6X1Q8NH79 312 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 LIPHQ8WWY8 451 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 ADAD1Q96M93 576 aaKnown RBP18.94■□□□□ 0.62
COL9A3-211ENST00000477612 MYLK2Q9H1R3 596 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 BARX1Q9HBU1 254 aaPredicted RBP18.94■□□□□ 0.62
COL9A3-211ENST00000477612 RIMS3Q9UJD0 308 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 MOKQ9UQ07 419 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 ATP23Q9Y6H3 246 aa18.94■□□□□ 0.62
COL9A3-211ENST00000477612 ATP6V1G2-DDX39BF2Z307 99 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 M0R3G1 203 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 NDUFS7O75251 213 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 OR6A2O95222 327 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 TSPAN19P0C672 248 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 HOXB4P17483 251 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-211ENST00000477612 OR1E2P47887 323 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 TAS2R41P59536 307 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 TNK1Q13470 666 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 PIN1Q13526 163 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-211ENST00000477612 CAMK2DQ13557 499 aa18.93■□□□□ 0.62
COL9A3-211ENST00000477612 LRRC23Q53EV4 343 aaPredicted RBP18.93■□□□□ 0.62
COL9A3-211ENST00000477612 CLEC9AQ6UXN8 241 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms