RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 A0A1W2PRG6 482 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 C11orf98E9PRG8 122 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 TNFRSF11BO00300 401 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 PIP5K1CO60331 668 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 KRT33AO76009 404 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF432O94892 652 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 GOSR1O95249 250 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 HPRP00739 348 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 ADAP00813 363 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 COX5AP20674 150 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 IL32P24001 234 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 DAP3P51398 398 aaKnown RBP11.6□□□□□ -0.55
TOP3A-205ENST00000477508 PRPS1P60891 318 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 GABPB1Q06547 395 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-205ENST00000477508 SFRP5Q5T4F7 317 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 TBPL2Q6SJ96 375 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 NHLRC1Q6VVB1 395 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 PAPD5Q8NDF8 572 aaKnown RBP11.6□□□□□ -0.55
TOP3A-205ENST00000477508 KISS1RQ969F8 398 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-205ENST00000477508 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
TOP3A-205ENST00000477508 LRR1Q96L50 414 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 INIPQ9NRY2 104 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 CCM2LQ9NUG4 571 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-205ENST00000477508 TAS2R16Q9NYV7 291 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
TOP3A-205ENST00000477508 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 CENPBD1B2RD01 187 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF587BE7ETH6 402 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 CASKO14936 926 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 OR10H3O60404 316 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 BCL10O95999 233 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 CST1P01037 141 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 EPXP11678 715 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 MAKP20794 623 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 FUT4P22083 530 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 COL8A1P27658 744 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 MPGP29372 298 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 AQP2P41181 271 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 GPR4P46093 362 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 OMPP47874 163 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 LIMS1P48059 325 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SELENOPP49908 381 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SH3BGRP55822 239 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 RPS4XP62701 263 aaKnown RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 RPL18Q07020 188 aaKnown RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 FAPQ12884 760 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SEC23BQ15437 767 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 ZBED5Q49AG3 693 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 ALG10Q5BKT4 473 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 TSPO2Q5TGU0 170 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 OR7E24Q6IFN5 339 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SLC35D2Q76EJ3 337 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 P2RY8Q86VZ1 359 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 LSRQ86X29 649 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 CXorf67Q86X51 503 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 GPR137CQ8N3F9 429 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 OR6X1Q8NH79 312 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 RAB3IPQ96QF0 476 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 B3GAT2Q9NPZ5 323 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SLC7A10Q9NS82 523 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF226Q9NYT6 803 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SAMHD1Q9Y3Z3 626 aaKnown RBP11.59□□□□□ -0.55
TOP3A-205ENST00000477508 LYVE1Q9Y5Y7 322 aa11.59□□□□□ -0.55
TOP3A-205ENST00000477508 SH3D21A4FU49 640 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 SLC35F4A4IF30 521 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 GNGT2O14610 69 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 CLOCKO15516 846 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 IGHV3-9P01782 118 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 HLA-DOBP13765 273 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 IFNGR1P15260 489 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 LAPTM4AQ15012 233 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 FAM205BPQ63HN1 556 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 C1orf94Q6P1W5 598 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-205ENST00000477508 TMEM123Q8N131 208 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 ZNF433Q8N7K0 673 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-205ENST00000477508 C1orf162Q8NEQ5 155 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-205ENST00000477508 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 GNPDA2Q8TDQ7 276 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 HSD17B8Q92506 261 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 C14orf79Q96F83 325 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 DUS3LQ96G46 650 aaKnown RBP11.58□□□□□ -0.56
TOP3A-205ENST00000477508 SLC25A44Q96H78 314 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-205ENST00000477508 FAM46AQ96IP4 442 aaKnown RBP11.58□□□□□ -0.56
TOP3A-205ENST00000477508 OR2M2Q96R28 347 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 TNFRSF13CQ96RJ3 184 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 MED18Q9BUE0 208 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 ACTR6Q9GZN1 396 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 MCCC2Q9HCC0 563 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 ALPK2Q86TB3 2170 aa11.58□□□□□ -0.56
TOP3A-205ENST00000477508 CENPEQ02224 2701 aa11.57□□□□□ -0.56
TOP3A-205ENST00000477508 CIB4A0PJX0 185 aa11.57□□□□□ -0.56
TOP3A-205ENST00000477508 MCIDASD6RGH6 385 aa11.57□□□□□ -0.56
TOP3A-205ENST00000477508 RPL36A-HNRNPH2H7BZ11 118 aa11.57□□□□□ -0.56
TOP3A-205ENST00000477508 PDLIM1O00151 329 aa11.57□□□□□ -0.56
TOP3A-205ENST00000477508 CDC42EP2O14613 210 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms