RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 NET1Q7Z628 596 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-228ENST00000476267 FUNDC1Q8IVP5 155 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 CCDC36Q8IYA8 594 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 C20orf196Q8IYI0 205 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 PIK3C3Q8NEB9 887 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 IL17RDQ8NFM7 739 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 CKAP2Q8WWK9 683 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 SLC38A4Q969I6 547 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 ANKRD27Q96NW4 1050 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 WFDC6Q9BQY6 131 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 USP22Q9UPT9 525 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 A0A087WUJ7 227 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 A0A1B0GX12 115 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 EVX1P49640 407 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 NPRL3Q12980 569 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 SNTB2Q13425 540 aaKnown RBP11.3□□□□□ -0.6
MRPL55-228ENST00000476267 DAG1Q14118 895 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 ADRM1Q16186 407 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 ALG10BQ5I7T1 473 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 FAM91A1Q658Y4 838 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 KRT80Q6KB66 452 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 CROCCP2Q86T23 111 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 MIER2Q8N344 545 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 SCAIQ8N9R8 606 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 DNAJA4Q8WW22 397 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-228ENST00000476267 MRPL24Q96A35 216 aaKnown RBP11.3□□□□□ -0.6
MRPL55-228ENST00000476267 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 LRR1Q96L50 414 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 SNX18Q96RF0 628 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 MRPL37Q9BZE1 423 aaKnown RBP11.3□□□□□ -0.6
MRPL55-228ENST00000476267 RAD21L1Q9H4I0 556 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 SLAMF8Q9P0V8 285 aa11.3□□□□□ -0.6
MRPL55-228ENST00000476267 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 M0R3G1 203 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 HLA-HP01893 362 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 ADRA2AP08913 450 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 APEX1P27695 318 aaKnown RBP11.29□□□□□ -0.6
MRPL55-228ENST00000476267 C1DQ13901 141 aaKnown RBP11.29□□□□□ -0.6
MRPL55-228ENST00000476267 FXNQ16595 210 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 ELFN2Q5R3F8 820 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 ULK3Q6PHR2 472 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 EPGNQ6UW88 154 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 RFLNBQ8N5W9 214 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 GOLGA6L1Q8N7Z2 621 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 LINC01356Q8N9X3 169 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 MGARPQ8TDB4 240 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 UBASH3BQ8TF42 649 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 TLCD1Q96CP7 247 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 MOGAT1Q96PD6 335 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 EMC6Q9BV81 110 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 RACGAP1Q9H0H5 632 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 IKZF5Q9H5V7 419 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
MRPL55-228ENST00000476267 MED29Q9NX70 200 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 VAPAQ9P0L0 249 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 RPS6KB2Q9UBS0 482 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 TESQ9UGI8 421 aaKnown RBP11.29□□□□□ -0.6
MRPL55-228ENST00000476267 TMEFF2Q9UIK5 374 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-228ENST00000476267 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
MRPL55-228ENST00000476267 SH3PXD2BA1X283 911 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 SYNGR3O43761 229 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
MRPL55-228ENST00000476267 ERCC1P07992 297 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-228ENST00000476267 CBLP22681 906 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 DVL1P1P54792 670 aaPredicted RBP11.28□□□□□ -0.6
MRPL55-228ENST00000476267 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 GSG1Q2KHT4 349 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 PAGE3Q5JUK9 113 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF584Q8IVC4 421 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 SLC47A1Q96FL8 570 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 TXNDC15Q96J42 360 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 TPK1Q9H3S4 243 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 TMEM38AQ9H6F2 299 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
MRPL55-228ENST00000476267 CMAHPQ9Y471 501 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 USH1CQ9Y6N9 552 aa11.28□□□□□ -0.6
MRPL55-228ENST00000476267 VSTM5A8MXK1 200 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 C5orf58C9J3I9 102 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 LRRN3E7EW58 273 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 TCF21O43680 179 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 C8BP07358 591 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 IFNGR1P15260 489 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 B4GALT1P15291 398 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 ITGA2P17301 1181 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 GPX2P18283 190 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 GLRXP35754 106 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 CAPZA2P47755 286 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 AQP5P55064 265 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 CDK6Q00534 326 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 PUDPQ08623 228 aa11.27□□□□□ -0.61
MRPL55-228ENST00000476267 OR1Q1Q15612 314 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms