RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ANKRD60Q9BZ19 345 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 CYP3A43Q9HB55 503 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 BFARQ9NZS9 450 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 DCDC2Q9UHG0 476 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 RIMS3Q9UJD0 308 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 UBQLN1Q9UMX0 589 aaKnown RBP4.02□□□□□ -1.77
SMC5-203ENST00000475540 SCML2Q9UQR0 700 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 INSRP06213 1382 aa4.02□□□□□ -1.77
SMC5-203ENST00000475540 NACAE9PAV3 2078 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 RSPH10B2B2RC85 870 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 ZNF879B4DU55 563 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 NVLO15381 856 aaKnown RBP4.01□□□□□ -1.77
SMC5-203ENST00000475540 ATP5LO75964 103 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 CSTAP01040 98 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 IGHV3-48P01763 117 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 IGHG4P01861 327 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 RSPH10BP0C881 870 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 CD9P21926 228 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 ANXA13P27216 316 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 HNRNPH3P31942 346 aaKnown RBP4.01□□□□□ -1.77
SMC5-203ENST00000475540 RPS5P46782 204 aaKnown RBP4.01□□□□□ -1.77
SMC5-203ENST00000475540 NUP107P57740 925 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 YWHAGP61981 247 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMC5-203ENST00000475540 ST3GAL3Q11203 375 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 LAGE3Q14657 143 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 ZNF630Q2M218 657 aaPredicted RBP4.01□□□□□ -1.77
SMC5-203ENST00000475540 VTCN1Q7Z7D3 282 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 TPRA1Q86W33 373 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 KIR3DL3Q8N743 410 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 ZNF433Q8N7K0 673 aaPredicted RBP4.01□□□□□ -1.77
SMC5-203ENST00000475540 SDR9C7Q8NEX9 313 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 GPX8Q8TED1 209 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 MITD1Q8WV92 249 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 SRSF12Q8WXF0 261 aaKnown RBP4.01□□□□□ -1.77
SMC5-203ENST00000475540 FMO2Q99518 471 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 NRTNQ99748 197 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 NMRAL1Q9HBL8 299 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 POPDC2Q9HBU9 364 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 LTBP1Q14766 1721 aa4.01□□□□□ -1.77
SMC5-203ENST00000475540 THSD7BQ9C0I4 1608 aa4□□□□□ -1.77
SMC5-203ENST00000475540 IGLV3-16A0A075B6K0 115 aa4□□□□□ -1.77
SMC5-203ENST00000475540 A0A0J9YYE9 177 aa4□□□□□ -1.77
SMC5-203ENST00000475540 TRBC1P01850 177 aa4□□□□□ -1.77
SMC5-203ENST00000475540 SRMP19623 302 aa4□□□□□ -1.77
SMC5-203ENST00000475540 SERPINA2P20848 420 aa4□□□□□ -1.77
SMC5-203ENST00000475540 GSTM3P21266 225 aa4□□□□□ -1.77
SMC5-203ENST00000475540 KITLGP21583 273 aa4□□□□□ -1.77
SMC5-203ENST00000475540 U2AF2P26368 475 aaKnown RBP eCLIP4□□□□□ -1.77
SMC5-203ENST00000475540 YWHABP31946 246 aaKnown RBP4□□□□□ -1.77
SMC5-203ENST00000475540 EPHX2P34913 555 aa4□□□□□ -1.77
SMC5-203ENST00000475540 LONP1P36776 959 aaKnown RBP4□□□□□ -1.77
SMC5-203ENST00000475540 LRRC63Q05C16 580 aa4□□□□□ -1.77
SMC5-203ENST00000475540 ASPHQ12797 758 aa4□□□□□ -1.77
SMC5-203ENST00000475540 DAZ2Q13117 558 aaKnown RBP4□□□□□ -1.77
SMC5-203ENST00000475540 VPS26BQ4G0F5 336 aa4□□□□□ -1.77
SMC5-203ENST00000475540 TMEM52BQ4KMG9 183 aa4□□□□□ -1.77
SMC5-203ENST00000475540 DMRTC1Q5HYR2 192 aa4□□□□□ -1.77
SMC5-203ENST00000475540 ENPP6Q6UWR7 440 aa4□□□□□ -1.77
SMC5-203ENST00000475540 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
SMC5-203ENST00000475540 CCDC65Q8IXS2 484 aa4□□□□□ -1.77
SMC5-203ENST00000475540 LINC01561Q8N1V8 128 aa4□□□□□ -1.77
SMC5-203ENST00000475540 MTURNQ8N3F0 131 aa4□□□□□ -1.77
SMC5-203ENST00000475540 OR4K14Q8NGD5 310 aa4□□□□□ -1.77
SMC5-203ENST00000475540 OR4D9Q8NGE8 314 aa4□□□□□ -1.77
SMC5-203ENST00000475540 ACMSDQ8TDX5 336 aa4□□□□□ -1.77
SMC5-203ENST00000475540 CXorf40BQ96DE9 158 aa4□□□□□ -1.77
SMC5-203ENST00000475540 C12orf42Q96LP6 360 aa4□□□□□ -1.77
SMC5-203ENST00000475540 GAL3ST1Q99999 423 aa4□□□□□ -1.77
SMC5-203ENST00000475540 SLC35A5Q9BS91 424 aa4□□□□□ -1.77
SMC5-203ENST00000475540 CHIAQ9BZP6 476 aa4□□□□□ -1.77
SMC5-203ENST00000475540 NIPAL2Q9H841 368 aa4□□□□□ -1.77
SMC5-203ENST00000475540 ZDHHC11Q9H8X9 412 aa4□□□□□ -1.77
SMC5-203ENST00000475540 NHEJ1Q9H9Q4 299 aaPredicted RBP4□□□□□ -1.77
SMC5-203ENST00000475540 MRPS30Q9NP92 439 aaKnown RBP4□□□□□ -1.77
SMC5-203ENST00000475540 NANSQ9NR45 359 aa4□□□□□ -1.77
SMC5-203ENST00000475540 DAZ3Q9NR90 486 aaKnown RBP4□□□□□ -1.77
SMC5-203ENST00000475540 CDH10Q9Y6N8 788 aa4□□□□□ -1.77
SMC5-203ENST00000475540 H3BMQ9 156 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 HIP1O00291 1037 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 CLOCKO15516 846 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 TMEM50AO95807 157 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 NPPAP01160 153 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 SERPIND1P05546 499 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 EIF2S2P20042 333 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 HTR1EP28566 365 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 RRM2P31350 389 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 RDXP35241 583 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 MAP3K8P41279 467 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 DAOAP59103 153 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 RAB11AP62491 216 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 CDK16Q00536 496 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 RAB11BQ15907 218 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 ZNF77Q15935 545 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 TWF2Q6IBS0 349 aaKnown RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 WDR74Q6RFH5 385 aaPredicted RBP3.99□□□□□ -1.77
SMC5-203ENST00000475540 LRRC31Q6UY01 552 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 LRRC74BQ6ZQY2 392 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 PQLC3Q8N755 202 aa3.99□□□□□ -1.77
SMC5-203ENST00000475540 MNS1Q8NEH6 495 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms