RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 VSTM5A8MXK1 200 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 E9PBE3 544 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 FZD7O75084 574 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 MPZL1O95297 269 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 AHSA1O95433 338 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 TFP02787 698 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 B4GALT1P15291 398 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 GRPRP30550 384 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 S100A3P33764 101 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 GLRXP35754 106 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 GIPRP48546 466 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 PTDSS1P48651 473 aaKnown RBP10.77□□□□□ -0.69
TRAF4-209ENST00000473421 TMEM33P57088 247 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 UBA52P62987 128 aaKnown RBP10.77□□□□□ -0.69
TRAF4-209ENST00000473421 CCL8P80075 99 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 MYBPC1Q00872 1141 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 RAB39AQ14964 217 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 SMU1Q2TAY7 513 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 UGT2A3Q6UWM9 527 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 C1QL2Q7Z5L3 287 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 PEX5LQ8IYB4 626 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 C20orf196Q8IYI0 205 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF440Q8IYI8 595 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 CNPY4Q8N129 248 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 ANKK1Q8NFD2 765 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 STK35Q8TDR2 534 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 SLC38A5Q8WUX1 472 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 C1orf147Q96MC9 270 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-209ENST00000473421 PANX1Q96RD7 426 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF747Q9BV97 191 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 MS4A5Q9H3V2 200 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF665Q9H7R5 613 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 MED29Q9NX70 200 aa10.77□□□□□ -0.69
TRAF4-209ENST00000473421 LRRN3E7EW58 273 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 TYROBPO43914 113 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 FSHBP01225 129 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 BCHEP06276 602 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 NUDT7P0C024 238 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 CCL2P13500 99 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 UQCRBP14927 111 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 NCF2P19878 526 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-209ENST00000473421 PAX7P23759 505 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 HTR2AP28223 471 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 SERPINB5P36952 375 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 C1DQ13901 141 aaKnown RBP10.76□□□□□ -0.69
TRAF4-209ENST00000473421 MFSD13AQ14CX5 517 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 GSG1Q2KHT4 349 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF311Q5JNZ3 666 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 TMEM255AQ5JRV8 349 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 LRRC34Q8IZ02 419 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 IL17RDQ8NFM7 739 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 DVL3Q92997 716 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-209ENST00000473421 VPS33AQ96AX1 596 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 NUF2Q9BZD4 464 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 OR51B6Q9H340 312 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF696Q9H7X3 374 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 PNPOQ9NVS9 261 aa10.76□□□□□ -0.69
TRAF4-209ENST00000473421 CMYA5Q8N3K9 4069 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 NUDT17P0C025 328 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 FAM157BP0CG42 384 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 COPZ1P61923 177 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 RAB1AP62820 205 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 GNA13Q14344 377 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 TUSC1Q2TAM9 212 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 LIN52Q52LA3 116 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 RNF220Q5VTB9 566 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 ACSM5Q6NUN0 579 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 WDR88Q6ZMY6 472 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF813Q6ZN06 617 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 SKA3Q8IX90 412 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-209ENST00000473421 PIK3C3Q8NEB9 887 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 VPS37AQ8NEZ2 397 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 BHLHE22Q8NFJ8 381 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-209ENST00000473421 ZBTB9Q96C00 473 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 TMEM19Q96HH6 336 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 OR52E6Q96RD3 313 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 WFDC6Q9BQY6 131 aa10.75□□□□□ -0.69
TRAF4-209ENST00000473421 SOX21Q9Y651 276 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-209ENST00000473421 HKR1P10072 659 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 LBPP18428 481 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 ABCE1P61221 599 aaKnown RBP10.74□□□□□ -0.69
TRAF4-209ENST00000473421 ZP4Q12836 540 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 CAMK2DQ13557 499 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 TRMT5Q32P41 509 aaKnown RBP10.74□□□□□ -0.69
TRAF4-209ENST00000473421 GLIPR1L2Q4G1C9 344 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 SPRNQ5BIV9 151 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 GKAP1Q5VSY0 366 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-209ENST00000473421 H1FNTQ75WM6 255 aaPredicted RBP10.74□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF627Q7L945 461 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 NUDCD3Q8IVD9 361 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 MAL2Q969L2 176 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 LRRC58Q96CX6 371 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 MOGAT1Q96PD6 335 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 SPATA9Q9BWV2 254 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 PPCSQ9HAB8 311 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 MOV10Q9HCE1 1003 aaKnown RBP10.74□□□□□ -0.69
TRAF4-209ENST00000473421 AIG1Q9NVV5 245 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 TAAR3PQ9P1P4 343 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 KLHL14Q9P2G3 628 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms