RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 RHCEP18577 417 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 CD53P19397 219 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 LOXP28300 417 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 GRPRP30550 384 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 CD79BP40259 229 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 RBM34P42696 430 aaKnown RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 CTBP2P56545 445 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 SPIBQ01892 262 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 CHRNB3Q05901 458 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 GABPB1Q06547 395 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 TRAM2Q15035 370 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 DEFB113Q30KQ7 82 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 IQCCQ4KMZ1 466 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 OTUD3Q5T2D3 398 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 PAQR6Q6TCH4 344 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 SPATA24Q86W54 205 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 CCDC103Q8IW40 242 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 AQP12AQ8IXF9 295 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 ADGRG5Q8IZF4 528 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 SLC43A2Q8N370 569 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 TMEM99Q8N816 258 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 PIK3C3Q8NEB9 887 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 WFDC11Q8NEX6 87 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 PFN4Q8NHR9 129 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 PIGXQ8TBF5 258 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 TMEM239Q8WW34 195 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 MBD6Q96DN6 1003 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 GMPPAQ96IJ6 420 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 ALPK1Q96QP1 1244 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 PSD2Q9BQI7 771 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 NAA11Q9BSU3 229 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 MMADHCQ9H3L0 296 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 MAGIXQ9H6Y5 334 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 NMNAT1Q9HAN9 279 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 MEPEQ9NQ76 525 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 KLHL9Q9P2J3 617 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 SEC14L4Q9UDX3 406 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 ING1Q9UK53 422 aaPredicted RBP8.09□□□□□ -1.11
SMC4-213ENST00000472282 EMC9Q9Y3B6 208 aa8.09□□□□□ -1.11
SMC4-213ENST00000472282 C2CD3Q4AC94 2353 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 DHRS12A0PJE2 317 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 ZNF716A6NP11 495 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 FZD7O75084 574 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 CH25HO95992 272 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 UMPSP11172 480 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 POU2F1P14859 743 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 AGTR1P30556 359 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 UGT2B10P36537 528 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 MAGEA2P43356 314 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 P2RY4P51582 365 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 H3F3AP84243 136 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 LTBQ06643 244 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 KEAP1Q14145 624 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 MFSD13AQ14CX5 517 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 ZNF74Q16587 644 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 FAM98BQ52LJ0 330 aaKnown RBP8.08□□□□□ -1.12
SMC4-213ENST00000472282 FGD3Q5JSP0 725 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 TMEM201Q5SNT2 666 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 C1orf146Q5VVC0 180 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 FAM214BQ7L5A3 538 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 CXorf67Q86X51 503 aaPredicted RBP8.08□□□□□ -1.12
SMC4-213ENST00000472282 TUSC5Q8IXB3 177 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 OR6S1Q8NH40 331 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 CANT1Q8WVQ1 401 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 ACOT11Q8WXI4 607 aaPredicted RBP8.08□□□□□ -1.12
SMC4-213ENST00000472282 ZC3HAV1LQ96H79 300 aaKnown RBP8.08□□□□□ -1.12
SMC4-213ENST00000472282 HS6ST2Q96MM7 605 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 PIP5K1AQ99755 562 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 ASPNQ9BXN1 380 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 SLC19A3Q9BZV2 496 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 KLHL4Q9C0H6 718 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 C12orf49Q9H741 205 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 BCO1Q9HAY6 547 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 IL1RAPQ9NPH3 570 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 GLRX2Q9NS18 164 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 C20orf141Q9NUB4 165 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 EMC3Q9P0I2 261 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 AURKCQ9UQB9 309 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 MED31Q9Y3C7 131 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 ITPR3Q14573 2671 aa8.08□□□□□ -1.12
SMC4-213ENST00000472282 A0A087WUU8 490 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 TRBV4-1A0A0J9YWV2 114 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 TCRBV3S1A0A5B6 114 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 CIB2O75838 187 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 GADD45GO95257 159 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 MT-ATP6P00846 226 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 THBDP07204 575 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 RAP2AP10114 183 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 CD8BP10966 210 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 IFI30P13284 250 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 NQO1P15559 274 aaKnown RBP8.07□□□□□ -1.12
SMC4-213ENST00000472282 CRYGSP22914 178 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 RRM2P31350 389 aa8.07□□□□□ -1.12
SMC4-213ENST00000472282 SLC16A1P53985 500 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms