RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TRBV4-1A0A0J9YWV2 114 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 A0A1W2PRG6 482 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 TCRBV3S1A0A5B6 114 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 SH3PXD2BA1X283 911 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 NPIPB13A6NJU9 1138 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ZNF726A6NNF4 738 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 NPIPB4C9JG80 1138 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ZNF587BE7ETH6 402 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 CASKO14936 926 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 CIB2O75838 187 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 FUT4P22083 530 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 EDNRAP25101 427 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 CCKARP32238 428 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 SELENOPP49908 381 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 HMGA2P52926 109 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 PRPS1P60891 318 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 RPS4XP62701 263 aaKnown RBP13.34□□□□□ -0.27
SNX13-205ENST00000471744 RPL18Q07020 188 aaKnown RBP13.34□□□□□ -0.27
SNX13-205ENST00000471744 FAPQ12884 760 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 TSPO2Q5TGU0 170 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 HIST2H2BCQ6DN03 193 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 OR2T5Q6IEZ7 315 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 OR7E24Q6IFN5 339 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 TBPL2Q6SJ96 375 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 SLC35D2Q76EJ3 337 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ASRGL1Q7L266 308 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 BHLHA15Q7RTS1 189 aaPredicted RBP13.34□□□□□ -0.27
SNX13-205ENST00000471744 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.34□□□□□ -0.27
SNX13-205ENST00000471744 OAFQ86UD1 273 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ADGRG5Q8IZF4 528 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 C1orf162Q8NEQ5 155 aaPredicted RBP13.34□□□□□ -0.27
SNX13-205ENST00000471744 OR2T29Q8NH02 315 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 LRR1Q96L50 414 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ALPK1Q96QP1 1244 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 INIPQ9NRY2 104 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 SLC7A10Q9NS82 523 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.34□□□□□ -0.27
SNX13-205ENST00000471744 UNC79Q9P2D8 2635 aa13.34□□□□□ -0.27
SNX13-205ENST00000471744 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 CENPEQ02224 2701 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 CIB4A0PJX0 185 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 PDLIM1O00151 329 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 TNFRSF11BO00300 401 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 BCL10O95999 233 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 HLA-DOBP13765 273 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 IFNGR1P15260 489 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 MAKP20794 623 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 IGHV1-2P23083 117 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 MPGP29372 298 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 AQP2P41181 271 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 DAP3P51398 398 aaKnown RBP13.33□□□□□ -0.28
SNX13-205ENST00000471744 SH3BGRP55822 239 aaPredicted RBP13.33□□□□□ -0.28
SNX13-205ENST00000471744 DAZAP2Q15038 168 aaPredicted RBP13.33□□□□□ -0.28
SNX13-205ENST00000471744 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 NHLRC1Q6VVB1 395 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 GPR137CQ8N3F9 429 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 ZNF433Q8N7K0 673 aaPredicted RBP13.33□□□□□ -0.28
SNX13-205ENST00000471744 OR6X1Q8NH79 312 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 CANT1Q8WVQ1 401 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 RSRC1Q96IZ7 334 aaKnown RBP13.33□□□□□ -0.28
SNX13-205ENST00000471744 WFIKKN1Q96NZ8 548 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 OR2M2Q96R28 347 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 CHID1Q9BWS9 393 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 REEP1Q9H902 201 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 MCCC2Q9HCC0 563 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 MED29Q9NX70 200 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 LYVE1Q9Y5Y7 322 aa13.33□□□□□ -0.28
SNX13-205ENST00000471744 SLC35F4A4IF30 521 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 MCIDASD6RGH6 385 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 CLOCKO15516 846 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 OR10H3O60404 316 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 SERPINI2O75830 405 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 LYZL6O75951 148 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
SNX13-205ENST00000471744 GPR4P46093 362 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 OMPP47874 163 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 LIMS1P48059 325 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 BIDP55957 195 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 LSM11P83369 360 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNX13-205ENST00000471744 SNTB1Q13884 538 aaKnown RBP13.32□□□□□ -0.28
SNX13-205ENST00000471744 SEC23BQ15437 767 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 ZBED5Q49AG3 693 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 TMEM123Q8N131 208 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 C17orf78Q8N4C9 275 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 HSD17B8Q92506 261 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 FAM46AQ96IP4 442 aaKnown RBP13.32□□□□□ -0.28
SNX13-205ENST00000471744 TXNDC15Q96J42 360 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 NGBQ9NPG2 151 aa13.32□□□□□ -0.28
SNX13-205ENST00000471744 HEATR1Q9H583 2144 aaKnown RBP13.31□□□□□ -0.28
SNX13-205ENST00000471744 TRAV27A0A087WT01 109 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms