RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 NTF4P34130 210 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 GGT2P36268 569 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 RUNX1T1Q06455 604 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 SEM1Q6ZVN7 128 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 P4HA3Q7Z4N8 544 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 C9orf106Q8NAJ2 232 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 MUS81Q96NY9 551 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 PITX2Q99697 317 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 TXNIPQ9H3M7 391 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 SH3BGRL2Q9UJC5 107 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 ZNF175Q9Y473 711 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 FLVCR1Q9Y5Y0 555 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 KALRNO60229 2985 aa17.08■□□□□ 0.32
PSPC1-203ENST00000471658 A0A1W2PRG6 482 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 HIST1H1CP16403 213 aaKnown RBP17.07■□□□□ 0.32
PSPC1-203ENST00000471658 GRK5P34947 590 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 RPS6KA3P51812 740 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 CLDN17P56750 224 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 RPL27P61353 136 aaKnown RBP17.07■□□□□ 0.32
PSPC1-203ENST00000471658 POU4F3Q15319 338 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ZNF362Q5T0B9 420 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ARMC4Q5T2S8 1044 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 C1orf185Q5T7R7 199 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 TTC23Q5W5X9 447 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 SLC43A2Q8N370 569 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ST6GALNAC3Q8NDV1 305 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 OR4K13Q8NH42 304 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 FAM81AQ8TBF8 368 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 SF3B5Q9BWJ5 86 aaKnown RBP17.07■□□□□ 0.32
PSPC1-203ENST00000471658 GRHPRQ9UBQ7 328 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 H0YAE9 185 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 PRRG2O14669 202 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ARPC3O15145 178 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 WDR1O75083 606 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 BCL10O95999 233 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 GABRA1P14867 456 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ACVR2AP27037 513 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 NOS3P29474 1203 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ACVR1BP36896 505 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 BIDP55957 195 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 MESTQ5EB52 335 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 NSUN5P2Q63ZY6 315 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 TUSC5Q8IXB3 177 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ASB10Q8WXI3 467 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 NDEL1Q9GZM8 345 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 RNF122Q9H9V4 155 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 CALHM2Q9HA72 323 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ZNF226Q9NYT6 803 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 GPR52Q9Y2T5 361 aa17.07■□□□□ 0.32
PSPC1-203ENST00000471658 ZGRF1Q86YA3 2104 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 ZFYVE26Q68DK2 2539 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 SLC35F4A4IF30 521 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 H7C1C5 153 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 SURF4O15260 269 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 PRKYO43930 277 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 TXNDC12O95881 172 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 IGHMP01871 453 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 SDHAP31040 664 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 CDKN2AP42771 156 aaKnown RBP17.06■□□□□ 0.32
PSPC1-203ENST00000471658 HSPA13P48723 471 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 SLC16A1P53985 500 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 LCN6P62502 163 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 RBPJQ06330 500 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 KEAP1Q14145 624 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 SNAPC1Q16533 368 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 PTCHD4Q6ZW05 846 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 USP51Q70EK9 711 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.06■□□□□ 0.32
PSPC1-203ENST00000471658 ARIH2OSQ8N7S6 290 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 TCEANCQ8N8B7 351 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 SDR9C7Q8NEX9 313 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 OR52E2Q8NGJ4 325 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 ZNF519Q8TB69 540 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 WNT2BQ93097 391 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 IL4I1Q96RQ9 567 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 KLHL9Q9P2J3 617 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 BAIAP2Q9UQB8 552 aa17.06■□□□□ 0.32
PSPC1-203ENST00000471658 ALPK2Q86TB3 2170 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 SMG1Q96Q15 3661 aaKnown RBP17.05■□□□□ 0.32
PSPC1-203ENST00000471658 IGKV3D-15A0A087WSY6 115 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 CD8B2A6NJW9 211 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 FIGNL2A6NMB9 653 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 ARHGEF9O43307 516 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 TOXO94900 526 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 HMGN1P05114 100 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 APEHP13798 732 aaKnown RBP17.05■□□□□ 0.32
PSPC1-203ENST00000471658 MRPL49Q13405 166 aaKnown RBP17.05■□□□□ 0.32
PSPC1-203ENST00000471658 CAMK2DQ13557 499 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 KRR1Q13601 381 aaKnown RBP17.05■□□□□ 0.32
PSPC1-203ENST00000471658 PDK3Q15120 406 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 ZNF691Q5VV52 312 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 CASP12Q6UXS9 341 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 BCDIN3DQ7Z5W3 292 aaKnown RBP17.05■□□□□ 0.32
PSPC1-203ENST00000471658 MCEMP1Q8IX19 187 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 GCNT2Q8N0V5 402 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 CYB561A3Q8NBI2 242 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 NMNAT3Q96T66 252 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 RAB26Q9ULW5 256 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 RNF6Q9Y252 685 aa17.05■□□□□ 0.32
PSPC1-203ENST00000471658 COL6A6A6NMZ7 2263 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms