RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SLC6A19Q695T7 634 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 PAQR6Q6TCH4 344 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 USP43Q70EL4 1123 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 FAM122BQ7Z309 247 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 JAZF1Q86VZ6 243 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 ATCAYQ86WG3 371 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 BEST3Q8N1M1 668 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 NPEPL1Q8NDH3 523 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 SDR9C7Q8NEX9 313 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 OR4K17Q8NGC6 315 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 OR5J2Q8NH18 312 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 KISS1RQ969F8 398 aaPredicted RBP15.75■□□□□ 0.11
HSPG2-208ENST00000471322 ANGPTL4Q9BY76 406 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 POTEKPQ9BYX7 375 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 KLHL1Q9NR64 748 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 SEC14L4Q9UDX3 406 aa15.75■□□□□ 0.11
HSPG2-208ENST00000471322 CAB39Q9Y376 341 aaPredicted RBP15.75■□□□□ 0.11
HSPG2-208ENST00000471322 SPIN1Q9Y657 262 aaPredicted RBP15.75■□□□□ 0.11
HSPG2-208ENST00000471322 A0A087WZY1 265 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 ZC3H12DA2A288 527 aaKnown RBP15.74■□□□□ 0.11
HSPG2-208ENST00000471322 OR6A2O95222 327 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 CPEP16870 476 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 SERPINB10P48595 397 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 SLC25A1P53007 311 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 LSM3P62310 102 aaKnown RBP15.74■□□□□ 0.11
HSPG2-208ENST00000471322 ACSM1Q08AH1 577 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 C19orf57Q0VDD7 668 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 TPBGQ13641 420 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 PLEKHN1Q494U1 663 aaPredicted RBP15.74■□□□□ 0.11
HSPG2-208ENST00000471322 GXYLT1Q4G148 440 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 SLC22A10Q63ZE4 541 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 H3F3CQ6NXT2 135 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 ARSKQ6UWY0 536 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 SHFQ7M4L6 423 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 LHFPL3Q86UP9 236 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 LSRQ86X29 649 aaPredicted RBP15.74■□□□□ 0.11
HSPG2-208ENST00000471322 FADS6Q8N9I5 356 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 POMGNT2Q8NAT1 580 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 KBTBD8Q8NFY9 601 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 OR2M3Q8NG83 312 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 MFSD8Q8NHS3 518 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 PAQR8Q8TEZ7 354 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 TM9SF4Q92544 642 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 SLC25A36Q96CQ1 311 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 DDOQ99489 341 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 HPF1Q9NWY4 346 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 NDUFB11Q9NX14 153 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 MRPL39Q9NYK5 338 aaKnown RBP15.74■□□□□ 0.11
HSPG2-208ENST00000471322 TEKT2Q9UIF3 430 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 PCDHGB7Q9Y5F8 929 aa15.74■□□□□ 0.11
HSPG2-208ENST00000471322 TEX13CA0A0J9YWL9 993 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 ANKRD33BA6NCL7 494 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 PYCARD-AS1I3L0S3 204 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 SBK2P0C263 348 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 ADH6P28332 368 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 DIO1P49895 249 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 NCS1P62166 190 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 GGTLC2Q14390 218 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 SSX1Q16384 188 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.73■□□□□ 0.11
HSPG2-208ENST00000471322 PLPPR5Q32ZL2 321 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 C1QL3Q5VWW1 255 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 IGFL2Q6UWQ7 119 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 IGFL3Q6UXB1 125 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 LINC00299Q6ZSB3 139 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 GPALPP1Q8IXQ4 340 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 SCAIQ8N9R8 606 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 GATAD2BQ8WXI9 593 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 RPL3LQ92901 407 aaKnown RBP15.73■□□□□ 0.11
HSPG2-208ENST00000471322 Q96M85 177 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 NMNAT3Q96T66 252 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 NMNAT2Q9BZQ4 307 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 SH2D2AQ9NP31 389 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 MOKQ9UQ07 419 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 B3GNT3Q9Y2A9 372 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 RP1L1Q8IWN7 2480 aaPredicted RBP15.73■□□□□ 0.11
HSPG2-208ENST00000471322 COL12A1Q99715 3063 aa15.73■□□□□ 0.11
HSPG2-208ENST00000471322 DAPL1A0PJW8 107 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 C12orf71A8MTZ7 269 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 AKAP8O43823 692 aaKnown RBP15.72■□□□□ 0.11
HSPG2-208ENST00000471322 CLPXO76031 633 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 SNX4O95219 450 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 BDH1Q02338 343 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 FOXF1Q12946 379 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 GALEQ14376 348 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 OR2G6Q5TZ20 316 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 ZNF468Q5VIY5 522 aaPredicted RBP15.72■□□□□ 0.11
HSPG2-208ENST00000471322 PLCZ1Q86YW0 608 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 PHC2Q8IXK0 858 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 WDSUB1Q8N9V3 476 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 ZNF485Q8NCK3 441 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 NDNFQ8TB73 568 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 UFD1Q92890 307 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 ZBTB8AQ96BR9 441 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 C1GALT1C1Q96EU7 318 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 ZNF649Q9BS31 505 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.72■□□□□ 0.11
HSPG2-208ENST00000471322 OR51E2Q9H255 320 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 ADGRL4Q9HBW9 690 aa15.72■□□□□ 0.11
HSPG2-208ENST00000471322 INIPQ9NRY2 104 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms