RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 TRIM69Q86WT6 500 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 LGI3Q8N145 548 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 OSR2Q8N2R0 312 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 VN1R2Q8NFZ6 395 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 OR10G4Q8NGN3 311 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 OR1F12Q8NHA8 337 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 SPRYD4Q8WW59 207 aaPredicted RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 FGF14Q92915 247 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 RBMXL1Q96E39 390 aaKnown RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 NEURL3Q96EH8 262 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 PELI1Q96FA3 418 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 C4orf36Q96KX1 117 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 WFIKKN1Q96NZ8 548 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 RNF2Q99496 336 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CHAC1Q9BUX1 264 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CAPS2Q9BXY5 557 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 HSD3B7Q9H2F3 369 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 REEP4Q9H6H4 257 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF586Q9NXT0 402 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CALYQ9NYX4 217 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 SPATA7Q9P0W8 599 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 ZNRD1Q9P1U0 126 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CD84Q9UIB8 345 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 ZNF229Q9UJW7 825 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CHMP2BQ9UQN3 213 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 CARHSP1Q9Y2V2 147 aaKnown RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 KNSTRNQ9Y448 316 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 TMEM14AQ9Y6G1 99 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 SETXQ7Z333 2677 aaKnown RBP0.62□□□□□ -2.31
UBXN4-207ENST00000471246 NLRC5Q86WI3 1866 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 MYO16Q9Y6X6 1858 aa0.62□□□□□ -2.31
UBXN4-207ENST00000471246 SF3B1O75533 1304 aaKnown RBP eCLIP0.62□□□□□ -2.313e-6■■■■■ 137.9
UBXN4-207ENST00000471246 TEP1Q99973 2627 aaKnown RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 IGLV1-50A0A075B6I6 118 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 IGHV5-10-1A0A0J9YXX1 117 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CIB4A0PJX0 185 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 KRT87PA6NCN2 255 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 C17orf51A8MQB3 221 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 K7EM74 188 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 SGK1O00141 431 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 BTN3A3O00478 584 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 XKRYO14609 159 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 RAD51BO15315 384 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 SEC22BO75396 215 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CCNKO75909 580 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CDRT1O95170 752 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 OXSR1O95747 527 aaPredicted RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 AP2A1O95782 977 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 SMIM10L1P0DMW3 83 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 IGHV1-8P0DP01 117 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CALCBP10092 127 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PRPS2P11908 318 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 COL8A2P25067 703 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 GCAP28676 217 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 SOX6P35712 828 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 DDOSTP39656 456 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CYB561P49447 251 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CASP4P49662 377 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ESRRGP62508 458 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PITPNAQ00169 270 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PDIA2Q13087 525 aaKnown RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PDZK1IP1Q13113 114 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ERCC8Q13216 396 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 VGLL4Q14135 290 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 HES5Q5TA89 166 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PYHIN1Q6K0P9 492 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PLBD1Q6P4A8 553 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ISLR2Q6UXK2 745 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 LINC00173Q6ZV60 143 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 NCCRP1Q6ZVX7 275 aaPredicted RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 H2AFVQ71UI9 128 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ZDHHC21Q8IVQ6 265 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CCDC65Q8IXS2 484 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CENPLQ8N0S6 344 aaPredicted RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 STPG2Q8N412 459 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ZADH2Q8N4Q0 377 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 FADS6Q8N9I5 356 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 FNDC5Q8NAU1 212 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CNNM3Q8NE01 707 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 OSTF1Q92882 214 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 UFD1Q92890 307 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 L3HYPDHQ96EM0 354 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 SMIM10Q96HG1 83 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 C7orf34Q96L11 122 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 AMDHD1Q96NU7 426 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 CDX2Q99626 313 aaPredicted RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 GABARAPL3Q9BY60 117 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 RAB34Q9BZG1 259 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 GBA3Q9H227 469 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 UGT1A7Q9HAW7 530 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 UGT1A10Q9HAW8 530 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 UGT1A8Q9HAW9 530 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 ELOVL3Q9HB03 270 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 C12orf10Q9HB07 376 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 THUMPD1Q9NXG2 353 aaKnown RBP0.61□□□□□ -2.31
UBXN4-207ENST00000471246 GIN1Q9NXP7 522 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 PCSK1NQ9UHG2 260 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 MMP17Q9ULZ9 603 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 MFHAS1Q9Y4C4 1052 aa0.61□□□□□ -2.31
UBXN4-207ENST00000471246 S4R3C0 116 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms