RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 VWA8A3KMH1 1905 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 A0A1B0GV90 55 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 GXYLT2A0PJZ3 443 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 A6NLC8 198 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 WASH3PC4AMC7 463 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 CD2P06729 351 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 LAMP2P13473 410 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 PRF1P14222 555 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 PGAM2P15259 253 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 SPI1P17947 270 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 VAMP1P23763 118 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 AK4P27144 223 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 SLC11A1P49279 550 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 MAP2K5Q13163 448 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 IRF5Q13568 498 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 RNF212Q495C1 297 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 ARSIQ5FYB1 569 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 SLC24A5Q71RS6 500 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 RANBP3LQ86VV4 465 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 TRAM1L1Q8N609 369 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 DMBX1Q8NFW5 382 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 TCTEX1D2Q8WW35 142 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 BRI3BPQ8WY22 251 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 TCEAL7Q9BRU2 100 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 C20orf24Q9BUV8 137 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 LAT2Q9GZY6 243 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 C6orf106Q9H6K1 298 aaPredicted RBP8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 SMCO4Q9NRQ5 59 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 NCDNQ9UBB6 729 aa8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 CARHSP1Q9Y2V2 147 aaKnown RBP8.73□□□□□ -1.01
NHLRC3-203ENST00000470258 C5orf51A6NDU8 294 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 IMPA2O14732 288 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ERI3O43414 337 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 RAD1O60671 282 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 RAB3DO95716 219 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 IFNGP01579 166 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SNRNP70P08621 437 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ELFN1P0C7U0 828 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 DAOP14920 347 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 GABRR2P28476 465 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 MECP2P51608 486 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 EPHB3P54753 998 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 GXYLT1Q4G148 440 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 OR4C11Q6IEV9 310 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ADAM5Q6NVV9 412 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 STAC2Q6ZMT1 411 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ZNF836Q6ZNA1 936 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ZNF627Q7L945 461 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 FAM129CQ86XR2 697 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 FAM219AQ8IW50 185 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 DND1Q8IYX4 353 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 OR56A1Q8NGH5 318 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 RELTQ969Z4 430 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 PHYHIPLQ96FC7 376 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SLC27A6Q9Y2P4 619 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ZNF281Q9Y2X9 895 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ATG4BQ9Y4P1 393 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 MYOFQ9NZM1 2061 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 USP34Q70CQ2 3546 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 A0A1B0GTH9 108 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 hCG_1809904A0A1W2PP81 198 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 A0A1W2PR64 198 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 A0A1W2PRV1 198 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 TMEM189-UBE2V1I3L0A0 370 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 UBE2CO00762 179 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ST8SIA5O15466 376 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 CTNSO60931 367 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 PMS2P2O95744 297 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SFTA3P0C7M3 94 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ST6GAL1P15907 406 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 MUC1P15941 1255 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ADH6P28332 368 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 PRSS3P35030 304 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 RPL4P36578 427 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 FRKP42685 505 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 NANOS3P60323 173 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 RAB2AP61019 212 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SKP1P63208 163 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 DHRS2Q13268 280 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 FAM76BQ5HYJ3 339 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 GAREM2Q75VX8 874 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 PCSK9Q8NBP7 692 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 OR5M8Q8NGP6 311 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 DCUN1D4Q92564 292 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 CMTM3Q96MX0 182 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 LMF1Q96S06 567 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 MYADMQ96S97 322 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SEC11CQ9BY50 192 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 WBP1LQ9NX94 342 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SAGE1Q9NXZ1 904 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 TAS2R8Q9NYW2 309 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 UPB1Q9UBR1 384 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 SLC25A13Q9UJS0 675 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 LSM7Q9UK45 103 aaKnown RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 ATXN7L1Q9ULK2 861 aaPredicted RBP8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 MED31Q9Y3C7 131 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 H7C4K7 107 aa8.72□□□□□ -1.01
NHLRC3-203ENST00000470258 LEFTY1O75610 366 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms