RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CCDC28BQ9BUN5 200 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 BPESC1Q9GZL8 116 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 IKZF5Q9H5V7 419 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 MOV10Q9HCE1 1003 aaKnown RBP11.5□□□□□ -0.57
CPSF4-210ENST00000469897 MED29Q9NX70 200 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 SELENONQ9NZV5 590 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 KCNS2Q9ULS6 477 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 CUBNO60494 3623 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 FBN3Q75N90 2809 aa11.5□□□□□ -0.57
CPSF4-210ENST00000469897 IGHV2OR16-5A0A0B4J2B6 119 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 LRP5LA4QPB2 252 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 PRORSD1PA6NEY8 169 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 EVPLLA8MZ36 301 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 TRAF3IP2O43734 574 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-210ENST00000469897 SERPINB7O75635 380 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 MFN2O95140 757 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 STAMBPO95630 424 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 HLA-HP01893 362 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 BGLAPP02818 100 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 CD79AP11912 226 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 DAOP14920 347 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 GPX2P18283 190 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 PPIBP23284 216 aaKnown RBP11.49□□□□□ -0.57
CPSF4-210ENST00000469897 IGFBP5P24593 272 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 PPOXP50336 477 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 PMS2P3Q13401 168 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 DAG1Q14118 895 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 FAM120AOSQ5T036 256 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 FAM91A1Q658Y4 838 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 ARMC8Q8IUR7 673 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 CCDC36Q8IYA8 594 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF540Q8NDQ6 660 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 LRRC8CQ8TDW0 803 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 SLC41A3Q96GZ6 507 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 ANKRD27Q96NW4 1050 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 MOGAT1Q96PD6 335 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF607Q96SK3 696 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 SOX7Q9BT81 388 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 ASPNQ9BXN1 380 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 TMEM38AQ9H6F2 299 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF442Q9H7R0 627 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-210ENST00000469897 B3GNT2Q9NY97 397 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.49□□□□□ -0.57
CPSF4-210ENST00000469897 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
CPSF4-210ENST00000469897 COL6A5A8TX70 2615 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 TRBV5-3A0A0A0MS03 114 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 A0A0B4J2E0 115 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 A0A1B0GX12 115 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF726A6NNF4 738 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF99A8MXY4 864 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 LYNX1G3V0Z9 82 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 M0QX08 132 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 AKAP8O43823 692 aaKnown RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 SERPINI2O75830 405 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 IGFBP1P08833 259 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 ADRA2AP08913 450 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 LYNX1P0DP58 116 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF23P17027 643 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 AHCYP23526 432 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 RGS8P57771 180 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 NCALDP61601 193 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 SRSF2Q01130 221 aaKnown RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 POU3F1Q03052 451 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 CAMK2DQ13557 499 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 MFSD13AQ14CX5 517 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 RUNDC3AQ59EK9 446 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 AGBL2Q5U5Z8 902 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 DLEU7Q6UYE1 221 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 SMYD1Q8NB12 490 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 ADPRHL1Q8NDY3 354 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 IL17RDQ8NFM7 739 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 OR6N1Q8NGY5 312 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 OR6S1Q8NH40 331 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 NEU4Q8WWR8 484 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 LRR1Q96L50 414 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 EPYCQ99645 322 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 NOX3Q9HBY0 568 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 TESQ9UGI8 421 aaKnown RBP11.48□□□□□ -0.57
CPSF4-210ENST00000469897 USP22Q9UPT9 525 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 POFUT2Q9Y2G5 429 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 CORINQ9Y5Q5 1042 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 NOX1Q9Y5S8 564 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 GMEB1Q9Y692 573 aa11.48□□□□□ -0.57
CPSF4-210ENST00000469897 ATRQ13535 2644 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 PLPP3O14495 311 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 ERCC1P07992 297 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 SRD5A1P18405 259 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 NR4A1P22736 598 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 RAB1AP62820 205 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 PUDPQ08623 228 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 SNTB2Q13425 540 aaKnown RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 DUSP7Q16829 419 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 GSG1Q2KHT4 349 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 KRTAP24-1Q3LI83 254 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 ZNF813Q6ZN06 617 aa11.47□□□□□ -0.57
CPSF4-210ENST00000469897 RANBP3LQ86VV4 465 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-210ENST00000469897 CDK20Q8IZL9 346 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms