RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ACVR1BP36896 505 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 DIO1P49895 249 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 SLC25A1P53007 311 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 RPL27P61353 136 aaKnown RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 GGTLC2Q14390 218 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TOMM20Q15388 145 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TIMM50Q3ZCQ8 353 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ZNF322Q6U7Q0 402 aaPredicted RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 LYPD4Q6UWN0 246 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ZBTB46Q86UZ6 589 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 GTPBP8Q8N3Z3 284 aaPredicted RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 SLC25A43Q8WUT9 341 aaPredicted RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 C5orf34Q96MH7 638 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 SYT4Q9H2B2 425 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TXNIPQ9H3M7 391 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ISG20L2Q9H9L3 353 aaKnown RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 INPP5EQ9NRR6 644 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 NDUFB11Q9NX14 153 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 CAB39Q9Y376 341 aaPredicted RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 CNTRLQ7Z7A1 2325 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 PROB1E7EW31 1015 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 MS4A18H0YCH9 400 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 CBR3O75828 277 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 GLCEO94923 617 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 LALBAP00709 142 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TFP02787 698 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 LIPCP11150 499 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 HLA-DOBP13765 273 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 CPEP16870 476 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ACTC1P68032 377 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ACTA1P68133 377 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 GALEQ14376 348 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 MELKQ14680 651 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 MS4A18Q3C1V0 323 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TMPRSS11AQ6ZMR5 421 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TMPRSS7Q7RTY8 843 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ZFP41Q8N8Y5 198 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 EXD3Q8N9H8 876 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 POMGNT2Q8NAT1 580 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ZNF248Q8NDW4 579 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ZHX1-C8orf76Q96EF9 292 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 CENPOQ9BU64 300 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 RERGLQ9H628 205 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 RNF167Q9H6Y7 350 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 SRA1Q9HD15 236 aaKnown RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 ABI3Q9P2A4 366 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 A0A1W2PQL4 384 aaPredicted RBP16.3■□□□□ 0.2
SMC4-211ENST00000469858 A0A1W2PRG6 482 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 DCTN6O00399 190 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 ZIC3O60481 467 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 SELENOFO60613 162 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 CD96P40200 585 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 CASRP41180 1078 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 HCCSP53701 268 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 TMEM176BQ3YBM2 270 aaPredicted RBP16.3■□□□□ 0.2
SMC4-211ENST00000469858 LINC01590Q5TEZ4 76 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 SPINK14Q6IE38 97 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 ADCK1Q86TW2 530 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 KLBQ86Z14 1044 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 PM20D2Q8IYS1 436 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 ZNF519Q8TB69 540 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 UFD1Q92890 307 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 TTTY10Q9BZA0 68 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 EXOSC4Q9NPD3 245 aaKnown RBP16.3■□□□□ 0.2
SMC4-211ENST00000469858 ISYNA1Q9NPH2 558 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 DEPPQ9NTK1 212 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 DLL3Q9NYJ7 618 aa16.3■□□□□ 0.2
SMC4-211ENST00000469858 IGHMP01871 453 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 PSMA1P25786 263 aaKnown RBP16.29■□□□□ 0.2
SMC4-211ENST00000469858 ZNF85Q03923 595 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 ZP4Q12836 540 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 LINC00696Q6ZRV3 163 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 SLC35F2Q8IXU6 374 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 RFLNBQ8N5W9 214 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 OR2T4Q8NH00 348 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 TIMP4Q99727 224 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 UTP23Q9BRU9 249 aaKnown RBP16.29■□□□□ 0.2
SMC4-211ENST00000469858 OR2M5A3KFT3 312 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 AKAP8O43823 692 aaKnown RBP16.29■□□□□ 0.2
SMC4-211ENST00000469858 GPX5O75715 221 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 OR2B6P58173 313 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 POU3F1Q03052 451 aaPredicted RBP16.29■□□□□ 0.2
SMC4-211ENST00000469858 SRSF6Q13247 344 aaKnown RBP16.29■□□□□ 0.2
SMC4-211ENST00000469858 TUBA3EQ6PEY2 450 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 IGF2-ASQ6U949 168 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 SSX6Q7RTT6 188 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 OR6V1Q8N148 313 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 ZNF511Q8NB15 262 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 DCSTAMPQ9H295 470 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 TIMMDC1Q9NPL8 285 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 MOKQ9UQ07 419 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 B3GALT5Q9Y2C3 310 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 FAM186AA6NE01 2351 aa16.29■□□□□ 0.2
SMC4-211ENST00000469858 PRSS37A4D1T9 235 aa16.28■□□□□ 0.2
SMC4-211ENST00000469858 ARGFXA6NJG6 315 aa16.28■□□□□ 0.2
SMC4-211ENST00000469858 LRRC3CA6NJW4 275 aa16.28■□□□□ 0.2
SMC4-211ENST00000469858 LRRTM2O43300 516 aa16.28■□□□□ 0.2
SMC4-211ENST00000469858 FKBP2P26885 142 aaKnown RBP16.28■□□□□ 0.2
SMC4-211ENST00000469858 TPBGQ13641 420 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms