RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 BAG2O95816 211 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 IFNGR1P15260 489 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 CHRNB4P30926 498 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 SELENOPP49908 381 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 DAPP51397 102 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 CLDN17P56750 224 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 LGALS3BPQ08380 585 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
COL9A3-209ENST00000469852 ALG10Q5BKT4 473 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 MTFR2Q6P444 385 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 FAHD1Q6P587 224 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 GALNT5Q7Z7M9 940 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 STK32CQ86UX6 486 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 OR8D4Q8NGM9 314 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 NRBF2Q96F24 287 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 GABARAPL1Q9H0R8 117 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 INIPQ9NRY2 104 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 EMC3Q9P0I2 261 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 REV1Q9UBZ9 1251 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 ZNF629Q9UEG4 869 aaPredicted RBP13.1□□□□□ -0.31
COL9A3-209ENST00000469852 PRSS50Q9UI38 385 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
COL9A3-209ENST00000469852 G3V2T6 193 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 MITFO75030 526 aaPredicted RBP13.09□□□□□ -0.31
COL9A3-209ENST00000469852 SMNDC1O75940 238 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ZNF432O94892 652 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 IL18BPO95998 194 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ADAP00813 363 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 IGHV3-9P01782 118 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ANPEPP15144 967 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 OPRM1P35372 400 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 SMSP52788 366 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 CTXN1P60606 82 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ACKR1Q16570 336 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 NIPAL3Q6P499 406 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 SMARCD3Q6STE5 483 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 CASP12Q6UXS9 341 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 TFAP2EQ6VUC0 442 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 SLC35D2Q76EJ3 337 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 LUZP2Q86TE4 346 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 HIPK1Q86Z02 1210 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 LURAP1LQ8IV03 231 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ZNF610Q8N9Z0 462 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ANKK1Q8NFD2 765 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 SAMD8Q96LT4 415 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 PSMG3-AS1Q96PY0 264 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 TSPAN32Q96QS1 320 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 CIB1Q99828 191 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 PLSCR4Q9NRQ2 329 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 COQ3Q9NZJ6 369 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 JKAMPQ9P055 326 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 NKX1-2Q9UD57 310 aaPredicted RBP13.09□□□□□ -0.31
COL9A3-209ENST00000469852 PROCRQ9UNN8 238 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 ADAM18Q9Y3Q7 739 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 CACNA1CQ13936 2221 aa13.09□□□□□ -0.31
COL9A3-209ENST00000469852 UTP20O75691 2785 aaKnown RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 SLC35F4A4IF30 521 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 EEF1E1-BLOC1S5C9J1V9 151 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 DVL2O14641 736 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 EEF1E1O43324 174 aaKnown RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 MRPL33O75394 65 aaKnown RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 NDUFB2O95178 105 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 CD8BP10966 210 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ANXA8P13928 327 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 OR3A2P47893 321 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 BIDP55957 195 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 PRPS1P60891 318 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ERVK-25P63136 954 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 RFX4Q33E94 735 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 PHYHD1Q5SRE7 291 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 CARD17Q5XLA6 110 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ZNF474Q6S9Z5 364 aaPredicted RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 RASSF6Q6ZTQ3 369 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ZDHHC13Q8IUH4 622 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 TMEM123Q8N131 208 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 SVOPLQ8N434 492 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ZNF808Q8N4W9 903 aaPredicted RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 FAM26EQ8N5C1 309 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ATG16L2Q8NAA4 619 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 LILRB4Q8NHJ6 448 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ASB5Q8WWX0 329 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 OR2M2Q96R28 347 aa13.08□□□□□ -0.32
COL9A3-209ENST00000469852 TACO1Q9BSH4 297 aaKnown RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 TMEFF2Q9UIK5 374 aaPredicted RBP13.08□□□□□ -0.32
COL9A3-209ENST00000469852 ZNF346Q9UL40 294 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms