RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ELFN2Q5R3F8 820 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 NHLRC1Q6VVB1 395 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 MREGQ8N565 214 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 RFLNBQ8N5W9 214 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 FGFBP3Q8TAT2 258 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 RNF217Q8TC41 542 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 GTF2H4Q92759 462 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 TRIM44Q96DX7 344 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-204ENST00000469207 ITCHQ96J02 903 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-204ENST00000469207 PARD6BQ9BYG5 372 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 OCEL1Q9H607 264 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 BCL2L10Q9HD36 194 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 THAP1Q9NVV9 213 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF224Q9NZL3 707 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 RPS6KB2Q9UBS0 482 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 REV1Q9UBZ9 1251 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 RCE1Q9Y256 329 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 CMAHPQ9Y471 501 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 TRPC5OSA6NMA1 111 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 VSTM5A8MXK1 200 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 TPST2O60704 377 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 SERPINI2O75830 405 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF35P13682 527 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 IDO1P14902 403 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 PAX7P23759 505 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 PTDSS1P48651 473 aaKnown RBP10.55□□□□□ -0.72
HDAC3-204ENST00000469207 ALKBH6Q3KRA9 238 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 FAM69AQ5T7M9 428 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 THSD4Q6ZMP0 1018 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 UEVLDQ8IX04 471 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 MSRB3Q8IXL7 192 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 C20orf196Q8IYI0 205 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 PIK3C3Q8NEB9 887 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 CLDND2Q8NHS1 167 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 NFKBIDQ8NI38 313 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 HPS1Q92902 700 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 YIPF5Q969M3 257 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 MRPL24Q96A35 216 aaKnown RBP10.55□□□□□ -0.72
HDAC3-204ENST00000469207 MAELQ96JY0 434 aaKnown RBP10.55□□□□□ -0.72
HDAC3-204ENST00000469207 MOGAT1Q96PD6 335 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 ARMC7Q9H6L4 198 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 METTL17Q9H7H0 456 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-204ENST00000469207 RMND5AQ9H871 391 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 SDR39U1Q9NRG7 319 aaPredicted RBP10.55□□□□□ -0.72
HDAC3-204ENST00000469207 SLC25A37Q9NYZ2 338 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 TREM2Q9NZC2 230 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 ZIM2Q9NZV7 527 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 USP22Q9UPT9 525 aa10.55□□□□□ -0.72
HDAC3-204ENST00000469207 TRAV36DV7A0A075B6V5 113 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 A0A087WUJ7 227 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 TMEM120BA0PK00 339 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 TMEM247A6NEH6 219 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 UBDO15205 165 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 OR2T1O43869 369 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 FZD7O75084 574 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 BGLAPP02818 100 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 ERCC1P07992 297 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-204ENST00000469207 NAT2P11245 290 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 B4GALT1P15291 398 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 NQO1P15559 274 aaKnown RBP10.54□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF14P17017 642 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-204ENST00000469207 HOXB9P17482 250 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-204ENST00000469207 GIPRP48546 466 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 RAB1AP62820 205 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 POU3F1Q03052 451 aaPredicted RBP10.54□□□□□ -0.72
HDAC3-204ENST00000469207 RUNX1T1Q06455 604 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 RAB39AQ14964 217 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 MFSD13AQ14CX5 517 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 GSG1Q2KHT4 349 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 ALG10BQ5I7T1 473 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 C6orf89Q6UWU4 347 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF813Q6ZN06 617 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 KIRREL3Q8IZU9 778 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 LSMEM1Q8N8F7 131 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 SLC38A4Q969I6 547 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 A4GALTQ9NPC4 353 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 KLHL14Q9P2G3 628 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 METRNQ9UJH8 293 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 PRDM4Q9UKN5 801 aa10.54□□□□□ -0.72
HDAC3-204ENST00000469207 LOC102725191A0A1B0GVB3 256 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 C5orf58C9J3I9 102 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 SYNGR3O43761 229 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 NCR1O76036 304 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 CLPTM1O96005 669 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 BMP2P12643 396 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 CCL2P13500 99 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 AHCYP23526 432 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 CFPP27918 469 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 DVL1P1P54792 670 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-204ENST00000469207 PMS2P3Q13401 168 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 OR1Q1Q15612 314 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 PAGE3Q5JUK9 113 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 WDR88Q6ZMY6 472 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 DEF8Q6ZN54 512 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 NET1Q7Z628 596 aaPredicted RBP10.53□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF584Q8IVC4 421 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 FUNDC1Q8IVP5 155 aa10.53□□□□□ -0.72
HDAC3-204ENST00000469207 SKA3Q8IX90 412 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms