RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 HPS1Q92902 700 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 LRR1Q96L50 414 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 BPESC1Q9GZL8 116 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 DENND2DQ9H6A0 471 aaPredicted RBP12.49□□□□□ -0.41
RB1-202ENST00000467505 CCDC167Q9P0B6 97 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 FBXL3Q9UKT7 428 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 CMAHPQ9Y471 501 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 NOX1Q9Y5S8 564 aa12.49□□□□□ -0.41
RB1-202ENST00000467505 IGHV2OR16-5A0A0B4J2B6 119 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 IGHV4-61A0A0C4DH41 118 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 M0R3G1 203 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 TRAF3IP2O43734 574 aaPredicted RBP12.48□□□□□ -0.41
RB1-202ENST00000467505 STAMBPO95630 424 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 C8BP07358 591 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 HOXB9P17482 250 aaPredicted RBP12.48□□□□□ -0.41
RB1-202ENST00000467505 PCMT1P22061 227 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 HGFACQ04756 655 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 GSG1Q2KHT4 349 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 SWT1Q5T5J6 900 aaKnown RBP12.48□□□□□ -0.41
RB1-202ENST00000467505 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 BLOC1S3Q6QNY0 202 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 MDP1Q86V88 176 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
RB1-202ENST00000467505 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 SVOPLQ8N434 492 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 TLCD1Q96CP7 247 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 C7orf26Q96N11 449 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 DOK1Q99704 481 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 TMEM38AQ9H6F2 299 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 TMBIM4Q9HC24 238 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 KLHL14Q9P2G3 628 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 SEC14L4Q9UDX3 406 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 POFUT2Q9Y2G5 429 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 GMEB1Q9Y692 573 aa12.48□□□□□ -0.41
RB1-202ENST00000467505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.411e-5■■■■□ 21.5
RB1-202ENST00000467505 A0A087WUJ7 227 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 ZNF726A6NNF4 738 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 CELA3BP08861 270 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 CD79AP11912 226 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 CBLP22681 906 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 HTR2AP28223 471 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 LSP1P33241 339 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 RPS23P62266 143 aaKnown RBP12.47□□□□□ -0.41
RB1-202ENST00000467505 POU3F1Q03052 451 aaPredicted RBP12.47□□□□□ -0.41
RB1-202ENST00000467505 PMS2P3Q13401 168 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 SCARB2Q14108 478 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 ADRM1Q16186 407 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 TRMT5Q32P41 509 aaKnown RBP12.47□□□□□ -0.41
RB1-202ENST00000467505 REP15Q6BDI9 236 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 ARMC8Q8IUR7 673 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 ZNF786Q8N393 782 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 C10orf53Q8N6V4 93 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 HIPK4Q8NE63 616 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 OR6N1Q8NGY5 312 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 LRRC8CQ8TDW0 803 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 UBASH3BQ8TF42 649 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 CKAP2Q8WWK9 683 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 SLC41A3Q96GZ6 507 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 CCDC28BQ9BUN5 200 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 ULBP2Q9BZM5 246 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 MS4A5Q9H3V2 200 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 NOX3Q9HBY0 568 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 MRPL39Q9NYK5 338 aaKnown RBP12.47□□□□□ -0.41
RB1-202ENST00000467505 SLC25A37Q9NYZ2 338 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.47□□□□□ -0.41
RB1-202ENST00000467505 ANGPT4Q9Y264 503 aa12.47□□□□□ -0.41
RB1-202ENST00000467505 CUBNO60494 3623 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 IGKV1D-42A0A075B6H8 117 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 A0A0B4J2E0 115 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 A0A1B0GX12 115 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 SH3PXD2BA1X283 911 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 SLC35F4A4IF30 521 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 MT-ATP6P00846 226 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 TACSTD2P09758 323 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 GPX2P18283 190 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 EVX1P49640 407 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 GALK2Q01415 458 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 PUDPQ08623 228 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 OR1Q1Q15612 314 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 CARD17Q5XLA6 110 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 KRT80Q6KB66 452 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 ZNF813Q6ZN06 617 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 PXKQ7Z7A4 578 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 TMEM43Q9BTV4 400 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 RABEP2Q9H5N1 569 aa12.46□□□□□ -0.41
RB1-202ENST00000467505 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 M0R233 179 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 SYNGR3O43761 229 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 SEC14L2O76054 403 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 UBL3O95164 117 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 OR6A2O95222 327 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 RAB36O95755 333 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 BGLAPP02818 100 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 IFNGR1P15260 489 aa12.45□□□□□ -0.42
RB1-202ENST00000467505 NR4A1P22736 598 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms