RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SNAPINO95295 136 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 H6PDO95479 791 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 OR8G3PP0DMU2 310 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF43P17038 809 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 TAF6P49848 677 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 C21orf59P57076 290 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 ACTA2P62736 377 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 ACTG2P63267 376 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 ACTC1P68032 377 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 ACTA1P68133 377 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 NDPQ00604 133 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 NSDHLQ15738 373 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 SPANXN2Q5MJ10 180 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 PPM1LQ5SGD2 360 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 Q6ZSR3 168 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 CENPQQ7L2Z9 268 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-209ENST00000467124 LUZP2Q86TE4 346 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 PNKDQ8N490 385 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 EID2Q8N6I1 236 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 LINC00612Q8N6U2 182 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 C14orf178Q8N769 122 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-209ENST00000467124 HSD17B11Q8NBQ5 300 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 BPIFCQ8NFQ6 507 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 OR10G3Q8NGC4 313 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 SLC7A13Q8TCU3 470 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 ACMSDQ8TDX5 336 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 C7orf33Q8WU49 177 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 CCDC126Q96EE4 140 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 MAGEB18Q96M61 343 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 SMIM14Q96QK8 99 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 OR5B12Q96R08 314 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 HIST1H4GQ99525 98 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 SELENOIQ9C0D9 397 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 GEMIN7Q9H840 131 aaKnown RBP2.96□□□□□ -1.94
VPS13A-209ENST00000467124 SIAEQ9HAT2 523 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 UGT1A10Q9HAW8 530 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 BEX1Q9HBH7 125 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 FGF20Q9NP95 211 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-209ENST00000467124 MTRF1LQ9UGC7 380 aaKnown RBP2.96□□□□□ -1.94
VPS13A-209ENST00000467124 DCDC2Q9UHG0 476 aa2.96□□□□□ -1.94
VPS13A-209ENST00000467124 CAB39Q9Y376 341 aaPredicted RBP2.96□□□□□ -1.94
VPS13A-209ENST00000467124 RLFQ13129 1914 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 FAM231BA6NCW3 169 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 USP27XA6NNY8 438 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 F6UB75 175 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 HAT1O14929 419 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 CACNG3O60359 315 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 MMP23AO75900 390 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 KLF8O95600 359 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 IGHV2-5P01817 119 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 ALDOBP05062 364 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 GTF2E2P29084 291 aaKnown RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 RORAP35398 523 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 HSD17B2P37059 387 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 GLP1RP43220 463 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 KIR2DS4P43632 304 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 CDKN1BP46527 198 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 ARRB1P49407 418 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 TMED10P49755 219 aaKnown RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 RGS8P57771 180 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 TAS2R19P59542 299 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 YWHAGP61981 247 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 MRPS22P82650 360 aaKnown RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 TLE4Q04727 773 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 MERTKQ12866 999 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 RSBN1Q5VWQ0 802 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 SPINK14Q6IE38 97 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 C11orf71Q6IPW1 123 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 SCARA5Q6ZMJ2 495 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 LHFPL3Q86UP9 236 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 ZNF557Q8N988 423 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 OR6C4Q8NGE1 309 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 OR51S1Q8NGJ8 323 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 MCUR1Q96AQ8 359 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 TMEM246Q9BRR3 403 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 TEKT3Q9BXF9 490 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 OR51M1Q9H341 326 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 CWH43Q9H720 699 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 ZDHHC11Q9H8X9 412 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 SH2D2AQ9NP31 389 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 CALYQ9NYX4 217 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 PDP1Q9P0J1 537 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 NAP1L2Q9ULW6 460 aaPredicted RBP2.95□□□□□ -1.94
VPS13A-209ENST00000467124 MSH6P52701 1360 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 TNRQ92752 1358 aa2.95□□□□□ -1.94
VPS13A-209ENST00000467124 CDHR2Q9BYE9 1310 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 CIB4A0PJX0 185 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 LRRIQ3A6PVS8 624 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 SUPT3HB4E1H0 165 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 AIM2O14862 343 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 HCRTR1O43613 425 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 SRSF10O75494 262 aaKnown RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 TCN1P20061 433 aaPredicted RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 TBPP20226 339 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 FUT3P21217 361 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 DCKP27707 260 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 VHLP40337 213 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 NSG1P42857 185 aa2.94□□□□□ -1.94
VPS13A-209ENST00000467124 RPS5P46782 204 aaKnown RBP2.94□□□□□ -1.94
VPS13A-209ENST00000467124 RORCP51449 518 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms