RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PIGMQ9H3S5 423 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 NRIP3Q9NQ35 241 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 PAPOLBQ9NRJ5 636 aaKnown RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 REV1Q9UBZ9 1251 aa13.49□□□□□ -0.25
NPHP4-205ENST00000466897 NOSIPQ9Y314 301 aaKnown RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 UBR5O95071 2799 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-205ENST00000466897 FREM1Q5H8C1 2179 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 OR6C65A6NJZ3 312 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 CENPBD1B2RD01 187 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 C11orf98E9PRG8 122 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 J3QKU1 62 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ARPC3O15145 178 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF432O94892 652 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 CNOT4O95628 575 aaKnown RBP13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ALPLP05186 524 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 CD8BP10966 210 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 OSMP13725 252 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 HLA-DOBP13765 273 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 CHRNB4P30926 498 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ALDH3A2P51648 485 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 SMSP52788 366 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 IL1RL1Q01638 556 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 FOXF2Q12947 444 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 DAG1Q14118 895 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 SLC35D2Q76EJ3 337 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 FAM122BQ7Z309 247 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 KIF18BQ86Y91 864 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 OR52L1Q8NGH7 329 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 OR6X1Q8NH79 312 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ASB5Q8WWX0 329 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 EME1Q96AY2 570 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF385AQ96PM9 386 aaKnown RBP13.48□□□□□ -0.25
NPHP4-205ENST00000466897 TXNIPQ9H3M7 391 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 KRT84Q9NSB2 600 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 COQ3Q9NZJ6 369 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 TMEFF2Q9UIK5 374 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-205ENST00000466897 ERRFI1Q9UJM3 462 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-205ENST00000466897 BAIAP2Q9UQB8 552 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 RNF6Q9Y252 685 aa13.48□□□□□ -0.25
NPHP4-205ENST00000466897 DIDO1Q9BTC0 2240 aaKnown RBP13.47□□□□□ -0.25
NPHP4-205ENST00000466897 MCIDASD6RGH6 385 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 PDLIM1O00151 329 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 DVL2O14641 736 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 EI24O14681 340 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 IMPA2O14732 288 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 IDH3BO43837 385 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 MRPL33O75394 65 aaKnown RBP13.47□□□□□ -0.25
NPHP4-205ENST00000466897 TXNDC12O95881 172 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 CGAP01215 116 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 F13BP05160 661 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 IFNGR1P15260 489 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 IGFBP5P24593 272 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 OR3A2P47893 321 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 CTXN1P60606 82 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 RPL27P61353 136 aaKnown RBP13.47□□□□□ -0.25
NPHP4-205ENST00000466897 ESRRGP62508 458 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 ARMC4Q5T2S8 1044 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-205ENST00000466897 GPR139Q6DWJ6 353 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 ZBTB49Q6ZSB9 765 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 CBR4Q8N4T8 237 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 PACRGLQ8N7B6 248 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 KATNB1Q9BVA0 655 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 EGLN3Q9H6Z9 239 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 SMURF2Q9HAU4 748 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 CLEC4AQ9UMR7 237 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
NPHP4-205ENST00000466897 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 BHLHE40O14503 412 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 SOCS2O14508 198 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 MSTNO14793 375 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 BCL10O95999 233 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 SDHAP31040 664 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 NTF4P34130 210 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 RPL4P36578 427 aaKnown RBP13.46□□□□□ -0.25
NPHP4-205ENST00000466897 PCYT1AP49585 367 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 RPS6KA3P51812 740 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 CLDN17P56750 224 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 TRIP10Q15642 601 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 ACKR1Q16570 336 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 SLC25A35Q3KQZ1 300 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 ANKRD34AQ69YU3 496 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 VWA1Q6PCB0 445 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 XKRXQ6PP77 449 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 TFAP2EQ6VUC0 442 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 NCCRP1Q6ZVX7 275 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-205ENST00000466897 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 NUFIP2Q7Z417 695 aaKnown RBP13.46□□□□□ -0.25
NPHP4-205ENST00000466897 MRGPRGQ86SM5 289 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 TMEM123Q8N131 208 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 LNX2Q8N448 690 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 CNEP1R1Q8N9A8 125 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 ZNF519Q8TB69 540 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 TEX47Q8TBZ9 253 aa13.46□□□□□ -0.25
NPHP4-205ENST00000466897 ASB10Q8WXI3 467 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms